19 homologs were found in PanDaTox collection
for query gene Rsph17029_3869 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3132  hypothetical protein  95.71 
 
 
396 aa  639    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0592357  n/a   
 
 
-
 
NC_009050  Rsph17029_3869  hypothetical protein  100 
 
 
396 aa  744    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.000457394  normal 
 
 
-
 
NC_009429  Rsph17025_3421  ABC transporter related  91.92 
 
 
396 aa  631  1e-180  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.952582  normal 
 
 
-
 
NC_013421  Pecwa_0465  protein of unknown function DUF214  33.83 
 
 
410 aa  183  4.0000000000000006e-45  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009425  Ent638_4234  hypothetical protein  32.42 
 
 
410 aa  173  5e-42  Enterobacter sp. 638  Bacteria  normal  0.496459  normal 
 
 
-
 
NC_012560  Avin_52020  permease protein of ABC transporter  33.84 
 
 
407 aa  168  2e-40  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3221  protein of unknown function DUF214  33.91 
 
 
395 aa  150  5e-35  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.612368  normal  0.761835 
 
 
-
 
NC_004578  PSPTO_2876  ABC transporter, permease protein, putative  32.69 
 
 
407 aa  146  6e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0331107  n/a   
 
 
-
 
NC_007005  Psyr_2627  hypothetical protein  34.08 
 
 
407 aa  144  2e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.124636  normal 
 
 
-
 
NC_008463  PA14_00850  hypothetical protein  36.68 
 
 
399 aa  141  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0095739  normal 
 
 
-
 
NC_009439  Pmen_2311  hypothetical protein  35.42 
 
 
397 aa  138  2e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.23479  hitchhiker  0.0000274996 
 
 
-
 
NC_009656  PSPA7_0143  hypothetical protein  39.29 
 
 
399 aa  134  3e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.24235  n/a   
 
 
-
 
NC_011883  Ddes_1318  protein of unknown function DUF214  29.71 
 
 
427 aa  130  4.0000000000000003e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3149  hypothetical protein  30.41 
 
 
410 aa  129  1.0000000000000001e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.750768  n/a   
 
 
-
 
NC_002977  MCA1840  hypothetical protein  32.91 
 
 
408 aa  123  6e-27  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4057  hypothetical protein  31.2 
 
 
399 aa  118  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.058101  normal  0.267304 
 
 
-
 
NC_009952  Dshi_0902  protein of unknown function DUF214  33.33 
 
 
399 aa  102  1e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.082954  normal 
 
 
-
 
NC_013173  Dbac_1668  protein of unknown function DUF214  30.26 
 
 
609 aa  94.7  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1002  protein of unknown function DUF214  23.61 
 
 
700 aa  47.8  0.0003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.95364  n/a   
 
 
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