More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_3640 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009050  Rsph17029_3640  short-chain dehydrogenase/reductase SDR  100 
 
 
251 aa  494  1e-139  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.137586 
 
 
-
 
NC_008254  Meso_3619  short-chain dehydrogenase/reductase SDR  65 
 
 
247 aa  317  1e-85  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00790972  n/a   
 
 
-
 
NC_011894  Mnod_3075  short-chain dehydrogenase/reductase SDR  51.23 
 
 
261 aa  229  4e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6079  short-chain dehydrogenase/reductase SDR  49.8 
 
 
255 aa  217  2e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2807  short-chain dehydrogenase/reductase SDR  48.21 
 
 
253 aa  215  5.9999999999999996e-55  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.422647 
 
 
-
 
NC_009636  Smed_1437  short-chain dehydrogenase/reductase SDR  48.99 
 
 
250 aa  192  4e-48  Sinorhizobium medicae WSM419  Bacteria  normal  0.46093  decreased coverage  0.00000100027 
 
 
-
 
NC_008786  Veis_4817  short-chain dehydrogenase/reductase SDR  45.42 
 
 
275 aa  190  2e-47  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.225049 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  45.04 
 
 
261 aa  187  1e-46  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  45.64 
 
 
262 aa  186  3e-46  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  43.85 
 
 
266 aa  184  1.0000000000000001e-45  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  46.53 
 
 
262 aa  179  2.9999999999999997e-44  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  43.55 
 
 
262 aa  175  6e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1178  short-chain dehydrogenase/reductase SDR  46.12 
 
 
262 aa  173  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  41.34 
 
 
262 aa  172  3.9999999999999995e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  41.83 
 
 
262 aa  171  1e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_011370  Rleg2_6085  short-chain dehydrogenase/reductase SDR  40.16 
 
 
260 aa  169  5e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5255  short-chain dehydrogenase/reductase SDR  43.39 
 
 
259 aa  168  6e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  41.6 
 
 
260 aa  168  9e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  40.24 
 
 
262 aa  166  2.9999999999999998e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1540  short-chain dehydrogenase/reductase SDR  40.66 
 
 
267 aa  166  2.9999999999999998e-40  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.239754  n/a   
 
 
-
 
NC_012792  Vapar_5671  short-chain dehydrogenase/reductase SDR  42.5 
 
 
271 aa  165  8e-40  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1734  short-chain dehydrogenase/reductase SDR  47.67 
 
 
275 aa  162  5.0000000000000005e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2375  short-chain dehydrogenase/reductase SDR  42.98 
 
 
265 aa  161  7e-39  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_1844  short-chain dehydrogenase/reductase SDR  38.71 
 
 
255 aa  160  1e-38  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.0017919 
 
 
-
 
NC_009484  Acry_1692  short-chain dehydrogenase/reductase SDR  49.47 
 
 
249 aa  159  4e-38  Acidiphilium cryptum JF-5  Bacteria  normal  0.912822  n/a   
 
 
-
 
NC_009952  Dshi_0620  3-oxoacyl-[acyl-carrier-protein] reductase  38.33 
 
 
250 aa  158  8e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.890979 
 
 
-
 
NC_010623  Bphy_4924  short-chain dehydrogenase/reductase SDR  40.71 
 
 
267 aa  152  4e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5646  short-chain dehydrogenase/reductase SDR  40.8 
 
 
256 aa  150  3e-35  Delftia acidovorans SPH-1  Bacteria  normal  decreased coverage  0.000512545 
 
 
-
 
NC_008148  Rxyl_0631  short-chain dehydrogenase/reductase SDR  41.09 
 
 
265 aa  149  4e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.76513  n/a   
 
 
-
 
NC_008688  Pden_4822  short-chain dehydrogenase/reductase SDR  38.33 
 
 
253 aa  149  5e-35  Paracoccus denitrificans PD1222  Bacteria  normal  0.237012  normal  0.451819 
 
 
-
 
NC_008254  Meso_0850  short-chain dehydrogenase/reductase SDR  38.11 
 
 
246 aa  147  1.0000000000000001e-34  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1255  3-ketoacyl-(acyl-carrier-protein) reductase  41.22 
 
 
247 aa  147  1.0000000000000001e-34  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2271  short-chain dehydrogenase/reductase SDR  41.63 
 
 
247 aa  144  2e-33  Jannaschia sp. CCS1  Bacteria  normal  0.807678  normal 
 
 
-
 
NC_012850  Rleg_0282  short-chain dehydrogenase/reductase SDR  37.86 
 
 
241 aa  142  3e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.550134  normal 
 
 
-
 
NC_008228  Patl_0952  3-ketoacyl-(acyl-carrier-protein) reductase  38.1 
 
 
253 aa  142  4e-33  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.00858984  n/a   
 
 
-
 
NC_009921  Franean1_1407  short-chain dehydrogenase/reductase SDR  40.74 
 
 
256 aa  139  3e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7515  short-chain dehydrogenase/reductase SDR  39.26 
 
 
246 aa  137  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_4120  short-chain dehydrogenase/reductase SDR  37.6 
 
 
250 aa  136  3.0000000000000003e-31  Serratia proteamaculans 568  Bacteria  normal  0.323528  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  35.34 
 
 
248 aa  136  4e-31  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  39.29 
 
 
244 aa  136  4e-31  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_011369  Rleg2_0253  short-chain dehydrogenase/reductase SDR  36.36 
 
 
241 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3724  short-chain dehydrogenase/reductase SDR  37.19 
 
 
247 aa  135  5e-31  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  38.17 
 
 
260 aa  135  8e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  37.19 
 
 
250 aa  135  8e-31  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3155  short-chain dehydrogenase/reductase SDR  35.66 
 
 
249 aa  134  9e-31  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009077  Mjls_5318  short-chain dehydrogenase/reductase SDR  37.82 
 
 
260 aa  135  9e-31  Mycobacterium sp. JLS  Bacteria  normal  0.11168  normal 
 
 
-
 
NC_008146  Mmcs_3711  short-chain dehydrogenase/reductase SDR  37.19 
 
 
247 aa  134  9.999999999999999e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2799  3-oxoacyl-(acyl-carrier-protein) reductase  37.25 
 
 
246 aa  134  9.999999999999999e-31  Salinispora tropica CNB-440  Bacteria  normal  0.786413  normal 
 
 
-
 
NC_008705  Mkms_3784  short-chain dehydrogenase/reductase SDR  37.19 
 
 
247 aa  134  9.999999999999999e-31  Mycobacterium sp. KMS  Bacteria  normal  0.513657  normal  0.265032 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  38.04 
 
 
256 aa  134  9.999999999999999e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4317  short-chain dehydrogenase/reductase SDR  39.18 
 
 
234 aa  133  3e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0991034  normal  0.658106 
 
 
-
 
NC_009832  Spro_0398  short-chain dehydrogenase/reductase SDR  38 
 
 
250 aa  133  3e-30  Serratia proteamaculans 568  Bacteria  normal  normal  0.199701 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  34.57 
 
 
246 aa  132  3.9999999999999996e-30  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  36.55 
 
 
248 aa  132  5e-30  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_009338  Mflv_1258  short-chain dehydrogenase/reductase SDR  38.93 
 
 
248 aa  132  5e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  hitchhiker  0.000465819 
 
 
-
 
NC_009512  Pput_3524  short-chain dehydrogenase/reductase SDR  39.06 
 
 
255 aa  132  6e-30  Pseudomonas putida F1  Bacteria  normal  normal  0.208712 
 
 
-
 
NC_002947  PP_2214  short-chain dehydrogenase/reductase SDR  39.06 
 
 
255 aa  132  6e-30  Pseudomonas putida KT2440  Bacteria  normal  0.339033  normal 
 
 
-
 
NC_008146  Mmcs_4937  short-chain dehydrogenase/reductase SDR  37.5 
 
 
247 aa  132  6e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1318  glucose-1-dehydrogenase  38.52 
 
 
248 aa  132  6e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.573048  normal  0.212962 
 
 
-
 
NC_008705  Mkms_5025  short-chain dehydrogenase/reductase SDR  37.5 
 
 
247 aa  132  6e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  34.57 
 
 
246 aa  132  6.999999999999999e-30  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2309  short-chain dehydrogenase/reductase SDR  39.84 
 
 
267 aa  132  6.999999999999999e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1953  short chain dehydrogenase/reductase family oxidoreductase  35.79 
 
 
269 aa  131  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.660502  hitchhiker  0.0000443121 
 
 
-
 
NC_013172  Bfae_00570  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  35.95 
 
 
267 aa  130  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.000200385  n/a   
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  38.78 
 
 
259 aa  130  2.0000000000000002e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0765  short-chain dehydrogenase/reductase SDR  34.17 
 
 
252 aa  130  2.0000000000000002e-29  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.184681  n/a   
 
 
-
 
NC_007413  Ava_1863  glucose 1-dehydrogenase  33.33 
 
 
269 aa  130  3e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3305  short-chain dehydrogenase/reductase SDR  36.21 
 
 
268 aa  130  3e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.552464 
 
 
-
 
NC_008726  Mvan_4185  short-chain dehydrogenase/reductase SDR  36.67 
 
 
248 aa  129  3e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1861  short-chain dehydrogenase/reductase SDR  37.3 
 
 
268 aa  129  4.0000000000000003e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.651686  normal  0.848972 
 
 
-
 
NC_013739  Cwoe_2104  short-chain dehydrogenase/reductase SDR  38.17 
 
 
250 aa  129  4.0000000000000003e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0259595  normal 
 
 
-
 
NC_010622  Bphy_2032  glucose-1-dehydrogenase  38.52 
 
 
248 aa  129  5.0000000000000004e-29  Burkholderia phymatum STM815  Bacteria  normal  0.569693  normal  0.784384 
 
 
-
 
NC_009654  Mmwyl1_4175  short-chain dehydrogenase/reductase SDR  36.84 
 
 
258 aa  129  6e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2297  short-chain dehydrogenase/reductase SDR  38.52 
 
 
267 aa  129  6e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0843841 
 
 
-
 
NC_008541  Arth_1790  short-chain dehydrogenase/reductase SDR  36.99 
 
 
255 aa  129  6e-29  Arthrobacter sp. FB24  Bacteria  normal  0.0755029  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  41.13 
 
 
258 aa  129  6e-29  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  34.68 
 
 
246 aa  129  7.000000000000001e-29  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_010320  Teth514_1808  short-chain dehydrogenase/reductase SDR  33.47 
 
 
245 aa  128  7.000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4226  short-chain dehydrogenase/reductase SDR  36.65 
 
 
255 aa  128  7.000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_009667  Oant_1182  short-chain dehydrogenase/reductase SDR  36.69 
 
 
263 aa  129  7.000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5326  short-chain dehydrogenase/reductase SDR  38.52 
 
 
256 aa  128  7.000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2469  short-chain dehydrogenase/reductase SDR  37.08 
 
 
249 aa  128  8.000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2313  glucose-1-dehydrogenase  37.85 
 
 
253 aa  128  9.000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1540  gluconate 5-dehydrogenase  36.89 
 
 
255 aa  127  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0166996  n/a   
 
 
-
 
NC_007951  Bxe_A3241  glucose-1-dehydrogenase  37.8 
 
 
248 aa  127  1.0000000000000001e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_4868  short-chain dehydrogenase/reductase SDR  38.15 
 
 
250 aa  127  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  0.758731  normal  0.103076 
 
 
-
 
NC_008254  Meso_3434  short-chain dehydrogenase/reductase SDR  36.03 
 
 
263 aa  127  1.0000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  0.101369  n/a   
 
 
-
 
NC_008554  Sfum_1374  3-oxoacyl-(acyl-carrier-protein) reductase  35.77 
 
 
247 aa  127  1.0000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2571  3-oxoacyl-[acyl-carrier-protein] reductase  39.83 
 
 
239 aa  127  1.0000000000000001e-28  Nocardioides sp. JS614  Bacteria  normal  0.0716578  n/a   
 
 
-
 
NC_009921  Franean1_7095  short-chain dehydrogenase/reductase SDR  39.26 
 
 
252 aa  128  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6809  short-chain dehydrogenase/reductase SDR  36.69 
 
 
254 aa  128  1.0000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1122  short chain dehydrogenase/reductase family oxidoreductase  34.68 
 
 
246 aa  127  2.0000000000000002e-28  Brucella suis 1330  Bacteria  normal  0.0726405  n/a   
 
 
-
 
NC_007348  Reut_B4557  Short-chain dehydrogenase/reductase SDR  34.52 
 
 
256 aa  127  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.221009  n/a   
 
 
-
 
NC_007492  Pfl01_2753  Short-chain dehydrogenase/reductase SDR  38.52 
 
 
260 aa  127  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.53957  normal 
 
 
-
 
NC_010551  BamMC406_2191  glucose-1-dehydrogenase  38 
 
 
253 aa  127  2.0000000000000002e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  37.7 
 
 
263 aa  127  2.0000000000000002e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2691  short-chain dehydrogenase/reductase SDR  39.27 
 
 
257 aa  127  2.0000000000000002e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.109818 
 
 
-
 
NC_010681  Bphyt_3231  short chain dehydrogenase  36 
 
 
245 aa  127  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.304941  normal 
 
 
-
 
NC_009664  Krad_3641  short-chain dehydrogenase/reductase SDR  40.76 
 
 
253 aa  127  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2003  short-chain dehydrogenase/reductase SDR  41.43 
 
 
252 aa  126  3e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.167955  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>