More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_1876 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_0234  TlpL, putative cytoplasmic chemoreceptor  98.37 
 
 
370 aa  713    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.997649  n/a   
 
 
-
 
NC_009049  Rsph17029_1876  methyl-accepting chemotaxis sensory transducer  100 
 
 
370 aa  725    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.0073215  normal 
 
 
-
 
NC_012850  Rleg_0071  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
494 aa  179  9e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0173  methyl-accepting chemotaxis sensory transducer  30.95 
 
 
545 aa  176  4e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.074609 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  54.27 
 
 
569 aa  176  6e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_011365  Gdia_1550  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
531 aa  175  9.999999999999999e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.483034  normal  0.19588 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  54.6 
 
 
619 aa  174  1.9999999999999998e-42  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  54.27 
 
 
569 aa  174  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
733 aa  172  5.999999999999999e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  55.7 
 
 
564 aa  172  7.999999999999999e-42  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  55.7 
 
 
640 aa  172  9e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
747 aa  171  1e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  52.35 
 
 
581 aa  172  1e-41  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  55.7 
 
 
640 aa  172  1e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  47.85 
 
 
677 aa  172  1e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  53.94 
 
 
566 aa  171  1e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
705 aa  172  1e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  53.94 
 
 
738 aa  171  2e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  48.33 
 
 
676 aa  171  2e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  52.69 
 
 
609 aa  171  2e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  53.94 
 
 
650 aa  170  3e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  55.06 
 
 
606 aa  169  5e-41  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  51.45 
 
 
494 aa  169  6e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  55.06 
 
 
642 aa  169  6e-41  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  54.04 
 
 
561 aa  169  8e-41  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  54.43 
 
 
602 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  55.06 
 
 
774 aa  169  1e-40  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  53.09 
 
 
602 aa  168  2e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  50 
 
 
682 aa  167  2e-40  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  51.18 
 
 
568 aa  167  2.9999999999999998e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  52.98 
 
 
560 aa  167  4e-40  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
599 aa  167  4e-40  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  51.18 
 
 
563 aa  166  5.9999999999999996e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
734 aa  166  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  50.59 
 
 
568 aa  166  6.9999999999999995e-40  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
640 aa  166  6.9999999999999995e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  51.76 
 
 
566 aa  165  1.0000000000000001e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  46.22 
 
 
566 aa  165  1.0000000000000001e-39  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
554 aa  165  1.0000000000000001e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
690 aa  165  1.0000000000000001e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  53.66 
 
 
611 aa  165  1.0000000000000001e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  51.08 
 
 
652 aa  165  1.0000000000000001e-39  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  44.39 
 
 
659 aa  164  2.0000000000000002e-39  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.22 
 
 
1089 aa  164  2.0000000000000002e-39  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
548 aa  164  3e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
637 aa  164  3e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  52.53 
 
 
693 aa  164  3e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
691 aa  163  4.0000000000000004e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  51.16 
 
 
569 aa  163  6e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
546 aa  163  6e-39  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  51.9 
 
 
554 aa  162  9e-39  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
449 aa  161  1e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_010511  M446_5211  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
445 aa  162  1e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.351267  normal  0.0732889 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  51.9 
 
 
553 aa  160  3e-38  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.22 
 
 
1088 aa  160  3e-38  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
686 aa  160  3e-38  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
597 aa  159  7e-38  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  49.43 
 
 
558 aa  159  7e-38  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
576 aa  158  2e-37  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  45.41 
 
 
608 aa  158  2e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_009943  Dole_0872  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
685 aa  157  2e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
1500 aa  158  2e-37  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
617 aa  157  3e-37  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
621 aa  157  3e-37  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_009943  Dole_0873  methyl-accepting chemotaxis sensory transducer  52.69 
 
 
591 aa  156  4e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  51.11 
 
 
559 aa  156  5.0000000000000005e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  48.66 
 
 
560 aa  155  7e-37  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
560 aa  155  7e-37  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  52.23 
 
 
733 aa  156  7e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  52.9 
 
 
962 aa  155  1e-36  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
505 aa  154  2e-36  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  46.79 
 
 
534 aa  154  2e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  48.69 
 
 
551 aa  154  2e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
735 aa  154  2e-36  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
735 aa  154  2e-36  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
553 aa  154  2.9999999999999998e-36  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  46.45 
 
 
553 aa  154  2.9999999999999998e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.55 
 
 
1046 aa  154  2.9999999999999998e-36  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  48.77 
 
 
1093 aa  154  2.9999999999999998e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  50.56 
 
 
551 aa  154  2.9999999999999998e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
450 aa  153  4e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
534 aa  153  5e-36  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
550 aa  153  5e-36  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
551 aa  153  5.9999999999999996e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
551 aa  152  1e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  45.16 
 
 
543 aa  152  1e-35  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  45.85 
 
 
562 aa  150  3e-35  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  54.43 
 
 
702 aa  150  3e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.7 
 
 
890 aa  150  4e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  49.13 
 
 
541 aa  150  4e-35  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  52.53 
 
 
740 aa  150  4e-35  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5958  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
445 aa  150  4e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.28154  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
563 aa  150  5e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
846 aa  150  5e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.7 
 
 
1019 aa  149  7e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  51.57 
 
 
727 aa  149  8e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  43.55 
 
 
551 aa  149  9e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  43.55 
 
 
551 aa  149  1.0000000000000001e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  51.19 
 
 
561 aa  147  2.0000000000000003e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
555 aa  148  2.0000000000000003e-34  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
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