30 homologs were found in PanDaTox collection
for query gene Rsph17025_4011 on replicon NC_009430
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009430  Rsph17025_4011  transketolase  100 
 
 
73 aa  155  2e-37  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0819  glycerol-3-phosphate cytidylyltransferase  57.14 
 
 
187 aa  78.6  3e-14  Jannaschia sp. CCS1  Bacteria  normal  normal  0.609533 
 
 
-
 
NC_009616  Tmel_1075  glycerol-3-phosphate cytidylyltransferase  50.85 
 
 
167 aa  77.8  4e-14  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00521191  n/a   
 
 
-
 
NC_010506  Swoo_1692  glycerol-3-phosphate cytidylyltransferase  52.38 
 
 
133 aa  76.6  1e-13  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0301  glycerol-3-phosphate cytidylyltransferase  47.22 
 
 
185 aa  75.9  2e-13  Thermotoga sp. RQ2  Bacteria  normal  0.675292  n/a   
 
 
-
 
NC_003910  CPS_4205  glycerol-3-phosphate cytidyltransferase  53.23 
 
 
131 aa  74.7  4e-13  Colwellia psychrerythraea 34H  Bacteria  normal  0.680646  n/a   
 
 
-
 
NC_008228  Patl_3211  cytidyltransferase-like protein  60.34 
 
 
132 aa  73.9  6e-13  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1422  glycerol-3-phosphate cytidylyltransferase  50.77 
 
 
151 aa  72.8  1e-12  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2953  glycerol-3-phosphate cytidylyltransferase  52.54 
 
 
131 aa  72.4  2e-12  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27890  Glycerol-3-phosphate cytidylyltransferase  53.57 
 
 
133 aa  71.6  3e-12  Brachybacterium faecium DSM 4810  Bacteria  normal  0.90735  n/a   
 
 
-
 
NC_009092  Shew_3695  cytidyltransferase-like protein  57.63 
 
 
130 aa  71.2  4e-12  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2321  cytidyltransferase-like protein  50 
 
 
143 aa  70.9  7e-12  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2003  glycerol-3-phosphate cytidylyltransferase  46.15 
 
 
142 aa  70.9  7e-12  Shewanella sp. ANA-3  Bacteria  normal  normal  0.10524 
 
 
-
 
NC_002976  SERP0300  glycerol-3-phosphate cytidylyltransferase  46.77 
 
 
132 aa  70.1  9e-12  Staphylococcus epidermidis RP62A  Bacteria  normal  0.582622  n/a   
 
 
-
 
NC_008345  Sfri_3930  cytidyltransferase-like protein  57.63 
 
 
130 aa  69.3  2e-11  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1691  glycerol-3-phosphate cytidylyltransferase  55.93 
 
 
132 aa  67.4  6e-11  Nocardioides sp. JS614  Bacteria  normal  0.0283743  n/a   
 
 
-
 
NC_009487  SaurJH9_0664  glycerol-3-phosphate cytidylyltransferase  43.55 
 
 
132 aa  67.4  7e-11  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0679  glycerol-3-phosphate cytidylyltransferase  43.55 
 
 
132 aa  67.4  7e-11  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5025  glycerol-3-phosphate cytidylyltransferase  47.46 
 
 
144 aa  65.5  2e-10  Paracoccus denitrificans PD1222  Bacteria  normal  0.310334  normal 
 
 
-
 
NC_008530  LGAS_1533  cytidylyltransferase  45.61 
 
 
116 aa  65.9  2e-10  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000327632  normal  0.335792 
 
 
-
 
NC_010468  EcolC_3377  cytidyltransferase-like protein  47.46 
 
 
131 aa  65.1  3e-10  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0255  cytidyltransferase-like protein  45.16 
 
 
131 aa  65.1  3e-10  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1747  cytidyltransferase-related domain protein  52.73 
 
 
451 aa  63.5  1e-09  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_05910  cytidyltransferase-related enzyme  53.7 
 
 
464 aa  62.4  2e-09  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  7.37737e-06 
 
 
-
 
NC_010001  Cphy_0300  glycerol-3-phosphate cytidylyltransferase  52.63 
 
 
128 aa  62  3e-09  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2588  cytidyltransferase-related domain protein  45.9 
 
 
447 aa  59.7  1e-08  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_14660  Glycerol-3-phosphate cytidylyltransferase  40.98 
 
 
127 aa  57.4  7e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0290332  decreased coverage  2.46532e-07 
 
 
-
 
NC_013170  Ccur_05830  Glycerol-3-phosphate cytidylyltransferase  42.11 
 
 
139 aa  55.5  2e-07  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.871653  hitchhiker  0.000166463 
 
 
-
 
NC_012039  Cla_0295  glycerol-3-phosphate cytidylyltransferase, putative  52.17 
 
 
129 aa  55.8  2e-07  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG2068  glycerol-3-phosphate cytidylyltransferase  37.21 
 
 
152 aa  42.7  0.002  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
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