37 homologs were found in PanDaTox collection
for query gene Rsph17025_3533 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009429  Rsph17025_3533  Type I restriction-modification system methyltransferase subunit-like protein  100 
 
 		 86 aa  167  4e-41  Rhodobacter sphaeroides ATCC 17025  Bacteria  decreased coverage  0.000840506  normal  1 
 
 
-
 
NC_009050  Rsph17029_3227  restriction modification system DNA specificity subunit  80.56 
 
 		 575 aa  115  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_1253  Type I restriction enzyme EcoAI specificity protein  73.61 
 
 		 597 aa  105  2e-22  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00376854  normal  1 
 
 
-
 
NC_009656  PSPA7_6044  type I restriction-modification system subunit S  63.93 
 
 		 547 aa  76.3  0.0000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.061065  n/a   
 
 
-
 
NC_010468  EcolC_3719  restriction modification system DNA specificity subunit  55.88 
 
 		 585 aa  75.5  0.0000000000002  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_0686  type I restriction-modification system, S subunit, putative  51.35 
 
 		 561 aa  75.1  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.840975  n/a   
 
 
-
 
NC_011353  ECH74115_5859  putative type I restriction-modification system, S subunit  53.52 
 
 		 584 aa  74.7  0.0000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_0835  restriction modification system DNA specificity domain  51.35 
 
 		 563 aa  75.1  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.835919  normal  0.945638 
 
 
-
 
NC_011080  SNSL254_A4880  putative type I restriction-modification system S subunit  53.52 
 
 		 571 aa  72.8  0.000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.960431 
 
 
-
 
NC_008639  Cpha266_1398  restriction modification system DNA specificity subunit  54.29 
 
 		 557 aa  72.4  0.000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_2862  restriction modification system DNA specificity subunit  64.91 
 
 		 589 aa  71.2  0.000000000005  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0822  restriction modification system DNA specificity subunit  62.5 
 
 		 577 aa  70.9  0.000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2496  subunit S of type I restriction-modification system  53.97 
 
 		 565 aa  69.7  0.00000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00268922  n/a   
 
 
-
 
NC_010524  Lcho_1311  restriction modification system DNA specificity subunit  52.94 
 
 		 578 aa  67.4  0.00000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008786  Veis_1015  restriction modification system DNA specificity subunit  53.97 
 
 		 575 aa  67.4  0.00000000006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4611  restriction modification system DNA specificity subunit  46.58 
 
 		 561 aa  65.1  0.0000000003  Pseudomonas putida F1  Bacteria  normal  0.483614  hitchhiker  0.0000795371 
 
 
-
 
NC_009665  Shew185_1978  restriction modification system DNA specificity subunit  43.37 
 
 		 616 aa  64.3  0.0000000006  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_3030  restriction modification system DNA specificity subunit  60.38 
 
 		 564 aa  63.2  0.000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_4742  type I restriction-modification system, S subunit  48.65 
 
 		 576 aa  61.6  0.000000004  Pseudomonas putida KT2440  Bacteria  normal  0.266617  hitchhiker  0.00441093 
 
 
-
 
NC_011899  Hore_20210  restriction modification system DNA specificity domain protein  43.66 
 
 		 565 aa  60.1  0.00000001  Halothermothrix orenii H 168  Bacteria  normal  0.266778  n/a   
 
 
-
 
NC_009715  CCV52592_1061  putative type I restriction-modification system, S subunit  50.98 
 
 		 528 aa  59.3  0.00000002  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1237  restriction modification system DNA specificity subunit  38.32 
 
 		 633 aa  58.5  0.00000003  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1281  restriction modification system DNA specificity subunit  46.03 
 
 		 398 aa  58.5  0.00000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE2744  type I restriction-modification system, S subunit  45.45 
 
 		 532 aa  57.4  0.00000006  Treponema denticola ATCC 35405  Bacteria  normal  0.0181132  n/a   
 
 
-
 
NC_010506  Swoo_0501  restriction modification system DNA specificity subunit  42.65 
 
 		 612 aa  56.2  0.0000002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.435558 
 
 
-
 
NC_007413  Ava_3267  restriction modification system DNA specificity subunit  39.19 
 
 		 557 aa  55.1  0.0000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0920403  decreased coverage  0.00535253 
 
 
-
 
NC_008709  Ping_1897  restriction modification system DNA specificity subunit  54.9 
 
 		 611 aa  54.3  0.0000005  Psychromonas ingrahamii 37  Bacteria  normal  1  hitchhiker  0.00184495 
 
 
-
 
NC_008609  Ppro_0355  restriction modification system DNA specificity subunit  50 
 
 		 590 aa  54.3  0.0000006  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1201  restriction modification system DNA specificity domain protein  44.26 
 
 		 572 aa  50.1  0.00001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0086  restriction modification system DNA specificity protein  40.58 
 
 		 538 aa  47.4  0.00007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1204  restriction modification system DNA specificity subunit  57.89 
 
 		 547 aa  45.8  0.0002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.340549  n/a   
 
 
-
 
NC_009943  Dole_2093  restriction modification system DNA specificity subunit  47.17 
 
 		 477 aa  45.1  0.0003  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1095  restriction modification system DNA specificity subunit  46.77 
 
 		 450 aa  45.4  0.0003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0854  restriction modification system DNA specificity subunit  54.29 
 
 		 595 aa  44.3  0.0006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.221182  normal  0.0643125 
 
 
-
 
NC_007925  RPC_3653  type I restriction enzyme StySPI specificity protein  44.26 
 
 		 460 aa  42  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.234587  normal  0.701676 
 
 
-
 
NC_009715  CCV52592_0371  type I restriction-modification system S subunit  44.68 
 
 		 323 aa  41.6  0.004  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3599  restriction modification system DNA specificity domain protein  48.94 
 
 		 532 aa  40.8  0.007  Thauera sp. MZ1T  Bacteria  normal  0.743632  n/a   
 
 
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