More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_2705 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  100 
 
 		 249 aa  502  1e-141  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  88.57 
 
 		 249 aa  435  1e-121  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  88.43 
 
 		 249 aa  434  1e-121  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  57.98 
 
 		 242 aa  291  9e-78  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  55.6 
 
 		 242 aa  288  4e-77  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  49.2 
 
 		 250 aa  236  4e-61  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.0375093 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  46.8 
 
 		 250 aa  217  1e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  47.92 
 
 		 250 aa  213  1.9999999999999998e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  45.41 
 
 		 263 aa  202  5e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  46.03 
 
 		 262 aa  199  3e-50  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.586423 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  45 
 
 		 257 aa  199  3.9999999999999996e-50  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  41.18 
 
 		 276 aa  186  3e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  39.57 
 
 		 241 aa  186  4e-46  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  42.06 
 
 		 256 aa  182  4.0000000000000006e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.858211 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  44.3 
 
 		 230 aa  182  6e-45  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  42.19 
 
 		 256 aa  165  5e-40  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  32.24 
 
 		 384 aa  113  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  32.44 
 
 		 376 aa  114  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal  1 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  31.91 
 
 		 384 aa  112  6e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  35.94 
 
 		 247 aa  112  7.000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  35.16 
 
 		 246 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  31.36 
 
 		 255 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  34.51 
 
 		 244 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal  1 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  34.51 
 
 		 244 aa  109  5e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  34.97 
 
 		 247 aa  108  8.000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  34.51 
 
 		 244 aa  107  2e-22  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal  1 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  34.07 
 
 		 246 aa  107  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  33.67 
 
 		 243 aa  105  7e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  32.39 
 
 		 246 aa  104  1e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  32.39 
 
 		 246 aa  104  2e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  32.61 
 
 		 243 aa  103  4e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.173486 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  33.76 
 
 		 243 aa  102  8e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  30.59 
 
 		 235 aa  101  1e-20  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  32.99 
 
 		 225 aa  100  2e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0893417 
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  30.45 
 
 		 253 aa  100  3e-20  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  31.84 
 
 		 257 aa  98.6  8e-20  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00106309 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  35.03 
 
 		 298 aa  98.2  1e-19  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal  1 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  31.47 
 
 		 249 aa  97.1  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  30.58 
 
 		 268 aa  96.7  3e-19  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  31.28 
 
 		 259 aa  96.3  4e-19  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.996332 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  31.28 
 
 		 259 aa  96.3  4e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.161686 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  32.49 
 
 		 243 aa  95.5  8e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.000118444 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  33.5 
 
 		 246 aa  94.7  1e-18  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  29.46 
 
 		 247 aa  93.6  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  29.71 
 
 		 249 aa  94  2e-18  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  31.02 
 
 		 299 aa  94.4  2e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  31.02 
 
 		 317 aa  94  2e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal  1 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  31.77 
 
 		 307 aa  93.2  3e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  30.04 
 
 		 281 aa  93.2  4e-18  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  35.75 
 
 		 236 aa  93.2  4e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  30.54 
 
 		 263 aa  92.8  5e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal  1 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  30.26 
 
 		 259 aa  92.4  6e-18  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  31.28 
 
 		 255 aa  92.4  6e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  30.58 
 
 		 248 aa  91.3  1e-17  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  34.41 
 
 		 255 aa  91.7  1e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  32.94 
 
 		 281 aa  90.5  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.999867 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  29.68 
 
 		 253 aa  90.5  3e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  27.52 
 
 		 252 aa  89.7  3e-17  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  32.8 
 
 		 255 aa  89.7  4e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  31.2 
 
 		 249 aa  89.7  4e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  29.52 
 
 		 253 aa  89.4  5e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal  1 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  32.49 
 
 		 245 aa  89  7e-17  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  32.64 
 
 		 254 aa  88.6  8e-17  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  29.96 
 
 		 251 aa  87.4  2e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  31.77 
 
 		 315 aa  87.8  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  25.89 
 
 		 248 aa  87  3e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  29.63 
 
 		 249 aa  84.7  0.000000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.371562 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  31.02 
 
 		 244 aa  85.1  0.000000000000001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  33.9 
 
 		 250 aa  84.3  0.000000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  29.69 
 
 		 259 aa  84.3  0.000000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.00010652 
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  28.43 
 
 		 252 aa  84  0.000000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  31.09 
 
 		 254 aa  83.6  0.000000000000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  29.63 
 
 		 249 aa  84.3  0.000000000000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  29.5 
 
 		 238 aa  83.6  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  29.5 
 
 		 238 aa  83.6  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  26.99 
 
 		 250 aa  82.8  0.000000000000005  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  32.02 
 
 		 240 aa  82  0.000000000000007  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  28.84 
 
 		 246 aa  80.5  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal  1 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  30.84 
 
 		 246 aa  80.5  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  28.63 
 
 		 262 aa  79.3  0.00000000000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  27.32 
 
 		 250 aa  79  0.00000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  1 
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  27.95 
 
 		 243 aa  79  0.00000000000007  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  29 
 
 		 239 aa  77.8  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal  1 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  28.5 
 
 		 239 aa  77.8  0.0000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  29.77 
 
 		 310 aa  77.8  0.0000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  25.59 
 
 		 231 aa  77.4  0.0000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  30.77 
 
 		 274 aa  76.3  0.0000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  28.89 
 
 		 254 aa  75.9  0.0000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal  1 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  29.84 
 
 		 234 aa  75.5  0.0000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0477074 
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  23.65 
 
 		 260 aa  74.7  0.000000000001  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal  1 
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  28.44 
 
 		 250 aa  74.7  0.000000000001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.395788 
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  29.84 
 
 		 293 aa  75.1  0.000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal  1 
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  26 
 
 		 252 aa  74.3  0.000000000002  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  26 
 
 		 252 aa  74.3  0.000000000002  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  28.44 
 
 		 250 aa  74.3  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal  1 
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  31.61 
 
 		 222 aa  73.6  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  27.91 
 
 		 237 aa  73.2  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal  1 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  27.05 
 
 		 242 aa  73.2  0.000000000004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  24.14 
 
 		 245 aa  72.8  0.000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  27.46 
 
 		 239 aa  72.4  0.000000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>