More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_2302 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  57.06 
 
 
682 aa  733    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  55.28 
 
 
696 aa  717    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  73.61 
 
 
667 aa  986    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  60.09 
 
 
662 aa  781    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  58.63 
 
 
682 aa  747    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  62.01 
 
 
667 aa  784    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  61.31 
 
 
673 aa  786    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  59.85 
 
 
652 aa  766    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  70.76 
 
 
667 aa  942    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  62.09 
 
 
667 aa  775    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  58.64 
 
 
675 aa  744    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  57.89 
 
 
667 aa  729    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  93.84 
 
 
666 aa  1268    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  60.9 
 
 
671 aa  783    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  59 
 
 
678 aa  749    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  60.66 
 
 
669 aa  773    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  55.78 
 
 
691 aa  712    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  93.84 
 
 
695 aa  1264    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  57.52 
 
 
682 aa  738    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  78.85 
 
 
681 aa  1064    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.39 
 
 
682 aa  714    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  62.76 
 
 
667 aa  798    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  61.34 
 
 
671 aa  780    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  57.66 
 
 
682 aa  738    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  59.67 
 
 
662 aa  781    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  62.24 
 
 
671 aa  801    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  59.31 
 
 
668 aa  726    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  64.93 
 
 
669 aa  845    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  62.06 
 
 
673 aa  797    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  53.96 
 
 
669 aa  678    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  59.52 
 
 
668 aa  751    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  77.24 
 
 
680 aa  1048    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  55.49 
 
 
684 aa  714    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  69.42 
 
 
670 aa  941    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  73.01 
 
 
667 aa  976    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  61.94 
 
 
671 aa  802    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  56.66 
 
 
682 aa  724    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  62.69 
 
 
660 aa  808    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  100 
 
 
666 aa  1367    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  60.98 
 
 
675 aa  798    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  55.95 
 
 
682 aa  728    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  62.09 
 
 
691 aa  787    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  61.49 
 
 
671 aa  784    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  73.16 
 
 
667 aa  981    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  72.67 
 
 
666 aa  965    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  79.59 
 
 
676 aa  1093    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  61.72 
 
 
668 aa  793    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  65.22 
 
 
671 aa  868    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  60.36 
 
 
669 aa  775    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  65.33 
 
 
673 aa  847    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  62.2 
 
 
670 aa  808    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  60.9 
 
 
671 aa  777    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  83.09 
 
 
685 aa  1144    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  62.16 
 
 
684 aa  786    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  61.79 
 
 
671 aa  805    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  58.41 
 
 
678 aa  739    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  49.18 
 
 
655 aa  627  1e-178  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  48.35 
 
 
656 aa  619  1e-176  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  44.93 
 
 
691 aa  570  1e-161  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.31 
 
 
668 aa  533  1e-150  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.95 
 
 
450 aa  521  1e-146  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011694  PHATRDRAFT_51245  carboxylase propionyl-coa carboxylase  44.35 
 
 
664 aa  521  1e-146  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  55.41 
 
 
498 aa  516  1.0000000000000001e-145  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.59 
 
 
666 aa  506  9.999999999999999e-143  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  46.13 
 
 
666 aa  508  9.999999999999999e-143  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  46.99 
 
 
667 aa  507  9.999999999999999e-143  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  42.75 
 
 
681 aa  504  1e-141  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  46.4 
 
 
673 aa  502  1e-141  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  40.82 
 
 
686 aa  502  1e-141  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  42.29 
 
 
652 aa  502  1e-141  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  56.37 
 
 
480 aa  504  1e-141  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  46.95 
 
 
674 aa  500  1e-140  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  47.67 
 
 
712 aa  501  1e-140  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  56.22 
 
 
450 aa  499  1e-140  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  43.47 
 
 
665 aa  499  1e-140  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  46.58 
 
 
674 aa  501  1e-140  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  45.36 
 
 
673 aa  499  1e-140  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  42.43 
 
 
661 aa  501  1e-140  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  45.45 
 
 
670 aa  501  1e-140  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_004310  BR0018  biotin carboxylase  45.36 
 
 
673 aa  497  1e-139  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  42.51 
 
 
649 aa  496  1e-139  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_007908  Rfer_2815  carbamoyl-phosphate synthase L chain, ATP-binding  44.18 
 
 
654 aa  498  1e-139  Rhodoferax ferrireducens T118  Bacteria  normal  0.102576  n/a   
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  44 
 
 
700 aa  493  9.999999999999999e-139  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  44.95 
 
 
675 aa  493  9.999999999999999e-139  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  43.13 
 
 
666 aa  494  9.999999999999999e-139  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  41.57 
 
 
653 aa  493  9.999999999999999e-139  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_007958  RPD_0350  carbamoyl-phosphate synthase L chain, ATP-binding  45.27 
 
 
679 aa  493  9.999999999999999e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.000448558 
 
 
-
 
NC_007964  Nham_2124  carbamoyl-phosphate synthase L chain, ATP-binding  43.21 
 
 
666 aa  494  9.999999999999999e-139  Nitrobacter hamburgensis X14  Bacteria  normal  0.494302  n/a   
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  45.95 
 
 
679 aa  492  9.999999999999999e-139  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_008044  TM1040_0738  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.71 
 
 
645 aa  492  9.999999999999999e-139  Ruegeria sp. TM1040  Bacteria  normal  0.623779  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  44.89 
 
 
643 aa  489  1e-137  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1359  3-methylcrotonyl-CoA carboxylase alpha subunit  43.4 
 
 
673 aa  490  1e-137  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.812437 
 
 
-
 
NC_006368  lpp1792  hypothetical protein  41.45 
 
 
654 aa  490  1e-137  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  41.3 
 
 
654 aa  489  1e-137  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  52.66 
 
 
493 aa  489  1e-137  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007798  NSE_0815  propionyl-CoA carboxylase, alpha subunit  41.88 
 
 
652 aa  491  1e-137  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  0.904428  n/a   
 
 
-
 
NC_007958  RPD_2535  carbamoyl-phosphate synthase L chain, ATP-binding  45.27 
 
 
671 aa  492  1e-137  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.56 
 
 
672 aa  486  1e-136  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_012791  Vapar_4719  Carbamoyl-phosphate synthase L chain ATP-binding  47.87 
 
 
667 aa  488  1e-136  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2604  acetyl-CoA carboxylase biotin carboxylase subunit  54.34 
 
 
445 aa  486  1e-136  Bacillus cereus AH187  Bacteria  normal  0.189257  n/a   
 
 
-
 
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