More than 300 homologs were found in PanDaTox collection
for query gene Rru_A3563 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A3563  chemotaxis sensory transducer  100 
 
 
563 aa  1123    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  50.35 
 
 
562 aa  494  9.999999999999999e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
562 aa  376  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  42.36 
 
 
561 aa  356  6.999999999999999e-97  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  42.69 
 
 
563 aa  355  8.999999999999999e-97  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
563 aa  352  1e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40.03 
 
 
561 aa  346  7e-94  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  40.74 
 
 
561 aa  337  3.9999999999999995e-91  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
563 aa  335  2e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
564 aa  325  1e-87  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
561 aa  325  1e-87  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  38.39 
 
 
563 aa  324  2e-87  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  38.82 
 
 
563 aa  324  3e-87  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
563 aa  323  4e-87  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  37.52 
 
 
563 aa  323  5e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  50.39 
 
 
567 aa  323  7e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  49.48 
 
 
688 aa  320  6e-86  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  39.61 
 
 
561 aa  319  7.999999999999999e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  50.4 
 
 
688 aa  318  1e-85  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
563 aa  317  4e-85  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  50.83 
 
 
566 aa  317  5e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
566 aa  314  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
563 aa  312  1e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
563 aa  312  1e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  51.64 
 
 
542 aa  312  1e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
560 aa  310  5e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
563 aa  310  5.9999999999999995e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  37.87 
 
 
565 aa  308  1.0000000000000001e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  47.98 
 
 
689 aa  307  3e-82  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
563 aa  307  3e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  48.02 
 
 
573 aa  307  4.0000000000000004e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
572 aa  306  5.0000000000000004e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
655 aa  306  5.0000000000000004e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  40.17 
 
 
565 aa  305  1.0000000000000001e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  38.61 
 
 
563 aa  305  1.0000000000000001e-81  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  51.23 
 
 
563 aa  305  2.0000000000000002e-81  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
561 aa  301  2e-80  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  49.6 
 
 
688 aa  301  3e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  40.41 
 
 
688 aa  301  3e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
561 aa  299  9e-80  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
562 aa  299  9e-80  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  50.99 
 
 
608 aa  299  1e-79  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
694 aa  298  2e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  38.83 
 
 
562 aa  298  3e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
672 aa  297  3e-79  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  39.53 
 
 
556 aa  297  3e-79  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
556 aa  296  5e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
560 aa  296  6e-79  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  46.72 
 
 
691 aa  296  9e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  44.63 
 
 
688 aa  296  9e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
562 aa  295  2e-78  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  49.14 
 
 
688 aa  294  3e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  37.12 
 
 
561 aa  293  4e-78  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010517  Mrad2831_6434  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
557 aa  293  8e-78  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  50 
 
 
562 aa  292  9e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  44.02 
 
 
656 aa  292  1e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  49.47 
 
 
559 aa  291  2e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
673 aa  291  2e-77  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  50 
 
 
675 aa  291  2e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  47.91 
 
 
602 aa  291  2e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  49.72 
 
 
562 aa  291  3e-77  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  50.14 
 
 
669 aa  291  3e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
563 aa  290  4e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  39.42 
 
 
577 aa  290  4e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2972  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
563 aa  290  5.0000000000000004e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  52 
 
 
674 aa  290  6e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
568 aa  289  7e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  52.15 
 
 
568 aa  289  9e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  49.03 
 
 
691 aa  289  1e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
567 aa  288  2e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  46.8 
 
 
656 aa  288  2e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
691 aa  287  2.9999999999999996e-76  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
563 aa  288  2.9999999999999996e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
561 aa  287  5e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  36.93 
 
 
558 aa  286  7e-76  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  37.63 
 
 
561 aa  286  7e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
558 aa  285  1.0000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  48.76 
 
 
561 aa  285  1.0000000000000001e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
651 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  42.92 
 
 
656 aa  285  2.0000000000000002e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
587 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
561 aa  284  3.0000000000000004e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_010510  Mrad2831_6098  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
649 aa  284  3.0000000000000004e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.71 
 
 
558 aa  284  3.0000000000000004e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_010505  Mrad2831_2546  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
649 aa  284  3.0000000000000004e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.389712  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
731 aa  283  6.000000000000001e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  47.41 
 
 
568 aa  283  8.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
559 aa  283  8.000000000000001e-75  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  37.35 
 
 
565 aa  282  1e-74  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  42.08 
 
 
682 aa  282  1e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  38.19 
 
 
561 aa  282  1e-74  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  49.14 
 
 
561 aa  281  2e-74  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  47.44 
 
 
674 aa  280  3e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
565 aa  281  3e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  46.98 
 
 
566 aa  280  4e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  45.76 
 
 
561 aa  280  4e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_010511  M446_6589  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
558 aa  280  5e-74  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.396718 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  44.47 
 
 
568 aa  280  5e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  37.52 
 
 
565 aa  280  5e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
561 aa  280  7e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
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