More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1268 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1268  HAD family hydrolase  100 
 
 
215 aa  426  1e-118  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2136  HAD-superfamily hydrolase, subfamily IA, variant 3  39.33 
 
 
219 aa  120  9.999999999999999e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.101925  n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  41.44 
 
 
222 aa  95.5  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0864  HAD family hydrolase  35.91 
 
 
226 aa  87.8  1e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  35.41 
 
 
247 aa  85.1  7e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_014158  Tpau_2146  HAD-superfamily hydrolase, subfamily IA, variant 3  32.32 
 
 
213 aa  84  0.000000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  36.84 
 
 
244 aa  83.6  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_007777  Francci3_2637  HAD family hydrolase  33.68 
 
 
286 aa  83.2  0.000000000000003  Frankia sp. CcI3  Bacteria  normal  0.403398  normal  0.292856 
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  28.24 
 
 
221 aa  82.4  0.000000000000004  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  34.22 
 
 
235 aa  80.9  0.00000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_008786  Veis_2075  HAD family hydrolase  33.15 
 
 
217 aa  80.9  0.00000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  decreased coverage  0.00099021 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  33 
 
 
227 aa  80.5  0.00000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_013946  Mrub_2205  HAD-superfamily hydrolase subfamily IA, variant 3  33.33 
 
 
228 aa  80.9  0.00000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.322675  normal 
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  26.67 
 
 
217 aa  80.1  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  32.97 
 
 
224 aa  78.6  0.00000000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1609  HAD-superfamily hydrolase  32.97 
 
 
224 aa  78.6  0.00000000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1060  haloacid dehalogenase, IA family protein  32.97 
 
 
224 aa  78.6  0.00000000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  34.27 
 
 
219 aa  78.6  0.00000000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_008785  BMASAVP1_A2296  HAD-superfamily hydrolase  32.97 
 
 
224 aa  78.6  0.00000000000007  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2990  HAD-superfamily hydrolase  32.97 
 
 
224 aa  78.6  0.00000000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2452  HAD-superfamily hydrolase, subfamily IA, variant 3  34.88 
 
 
232 aa  78.2  0.00000000000008  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1066  haloacid dehalogenase, IA family protein  32.43 
 
 
224 aa  77.8  0.0000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  30.8 
 
 
248 aa  77.8  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_1218  putative hydrolase  32.97 
 
 
762 aa  77.4  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1819  HAD family hydrolase  35.98 
 
 
230 aa  77  0.0000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  33 
 
 
249 aa  77  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_008542  Bcen2424_2430  HAD family hydrolase  35.98 
 
 
230 aa  77  0.0000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  27.96 
 
 
238 aa  76.3  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  33.85 
 
 
232 aa  76.3  0.0000000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_008312  Tery_2465  HAD family hydrolase  28.02 
 
 
220 aa  75.9  0.0000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0922  hydrolase, haloacid dehalogenase-like family  28.32 
 
 
235 aa  75.9  0.0000000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4313  hydrolase, haloacid dehalogenase-like family  28.32 
 
 
235 aa  75.5  0.0000000000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  30.85 
 
 
218 aa  75.5  0.0000000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1034  hydrolase  29.95 
 
 
217 aa  75.5  0.0000000000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4889  HAD family hydrolase  37.36 
 
 
233 aa  75.5  0.0000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.351284  normal  0.0730929 
 
 
-
 
NC_010508  Bcenmc03_2435  HAD family hydrolase  35.98 
 
 
227 aa  75.5  0.0000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.396573  normal  0.95205 
 
 
-
 
NC_007516  Syncc9605_1138  HAD family hydrolase  34.85 
 
 
216 aa  75.1  0.0000000000007  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0863  HAD-superfamily hydrolase  34.91 
 
 
224 aa  75.1  0.0000000000007  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00905337  n/a   
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  32.6 
 
 
241 aa  75.1  0.0000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  31.75 
 
 
227 aa  75.1  0.0000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5761  HAD family hydrolase  35.37 
 
 
230 aa  74.7  0.0000000000009  Burkholderia sp. 383  Bacteria  normal  normal  0.434406 
 
 
-
 
NC_013172  Bfae_25280  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  33.5 
 
 
226 aa  74.7  0.0000000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0213796  n/a   
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  29.21 
 
 
230 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  31.73 
 
 
220 aa  74.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2523  HAD family hydrolase  28.97 
 
 
219 aa  74.7  0.000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000000000119514  n/a   
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  30.84 
 
 
230 aa  73.9  0.000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  26.88 
 
 
235 aa  74.3  0.000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_013595  Sros_1428  putative phosphatase  35.76 
 
 
212 aa  74.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.307964  normal  0.0744833 
 
 
-
 
NC_009953  Sare_4356  HAD family hydrolase  32.24 
 
 
233 aa  73.9  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.582602 
 
 
-
 
NC_007413  Ava_3074  HAD family hydrolase  30.69 
 
 
222 aa  73.6  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  34.62 
 
 
225 aa  73.9  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_009429  Rsph17025_3578  hypothetical protein  33.5 
 
 
227 aa  73.6  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3898  HAD-superfamily hydrolase, subfamily IA, variant 3  31.61 
 
 
233 aa  73.2  0.000000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  32.77 
 
 
241 aa  73.2  0.000000000003  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_007963  Csal_0637  HAD family hydrolase  36.7 
 
 
230 aa  73.2  0.000000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.808868  n/a   
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  30.2 
 
 
224 aa  73.2  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_008530  LGAS_1217  HAD family sugar phosphatase  28.72 
 
 
226 aa  73.2  0.000000000003  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3307  HAD-superfamily hydrolase subfamily IA, variant 3  33.15 
 
 
735 aa  73.2  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.081208  normal 
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  33.82 
 
 
217 aa  72.4  0.000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_008312  Tery_0409  HAD family hydrolase  28.18 
 
 
228 aa  72.8  0.000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_18961  phosphatase/phosphohexomutase  28.83 
 
 
225 aa  72.8  0.000000000004  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.452816 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  30.32 
 
 
271 aa  72.4  0.000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2251  phosphoglycolate phosphatase  31.41 
 
 
229 aa  72  0.000000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2943  HAD-superfamily hydrolase, subfamily IA, variant 3  27.8 
 
 
218 aa  72  0.000000000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.86932  normal 
 
 
-
 
NC_009441  Fjoh_1356  HAD family hydrolase  25 
 
 
221 aa  71.6  0.000000000009  Flavobacterium johnsoniae UW101  Bacteria  normal  0.14421  n/a   
 
 
-
 
NC_004116  SAG0181  HAD superfamily hydrolase  26.88 
 
 
214 aa  70.9  0.00000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3972  HAD family hydrolase  30.14 
 
 
241 aa  70.9  0.00000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2101  HAD family hydrolase  34.68 
 
 
231 aa  70.9  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  29.77 
 
 
236 aa  70.9  0.00000000002  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  34.64 
 
 
218 aa  70.9  0.00000000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013730  Slin_2846  HAD-superfamily hydrolase, subfamily IA, variant 3  34.78 
 
 
226 aa  70.9  0.00000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.281035  normal  0.462582 
 
 
-
 
NC_008609  Ppro_2888  HAD family hydrolase  33.33 
 
 
215 aa  70.5  0.00000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3956  HAD superfamily hydrolase  27.73 
 
 
220 aa  70.1  0.00000000003  Bacillus cereus E33L  Bacteria  normal  0.945579  n/a   
 
 
-
 
NC_010551  BamMC406_2343  HAD family hydrolase  36.42 
 
 
227 aa  69.7  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.187691 
 
 
-
 
NC_013946  Mrub_0251  HAD-superfamily hydrolase subfamily IA, variant 3  29.84 
 
 
216 aa  70.1  0.00000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.822561 
 
 
-
 
NC_008390  Bamb_2477  HAD family hydrolase  36.42 
 
 
227 aa  69.7  0.00000000003  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  30.43 
 
 
243 aa  69.7  0.00000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  31.73 
 
 
213 aa  69.7  0.00000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  24.73 
 
 
226 aa  69.7  0.00000000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_003909  BCE_4276  HAD superfamily hydrolase  25.12 
 
 
220 aa  69.3  0.00000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1319  HAD family hydrolase  37.04 
 
 
219 aa  69.3  0.00000000004  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3134  HAD-superfamily hydrolase, subfamily IA, variant 3  24.41 
 
 
219 aa  69.3  0.00000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.833655  normal 
 
 
-
 
NC_009784  VIBHAR_05174  phosphoglycolate phosphatase  25.95 
 
 
256 aa  68.9  0.00000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_1179  HAD-superfamily hydrolase, subfamily IA, variant 3  29.25 
 
 
224 aa  69.3  0.00000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.0108500000000004e-18 
 
 
-
 
NC_007413  Ava_4630  HAD family hydrolase  27.84 
 
 
225 aa  68.9  0.00000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00554039 
 
 
-
 
NC_007492  Pfl01_3528  HAD family hydrolase  31.73 
 
 
222 aa  68.9  0.00000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.58335  normal  0.428685 
 
 
-
 
NC_010002  Daci_5978  HAD family hydrolase  33.33 
 
 
230 aa  68.9  0.00000000005  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.367832 
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  30.27 
 
 
228 aa  68.9  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  30.27 
 
 
228 aa  68.9  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  30.27 
 
 
228 aa  68.9  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  25.54 
 
 
221 aa  68.9  0.00000000005  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1824  HAD family hydrolase  31.74 
 
 
222 aa  68.6  0.00000000006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2229  phosphoglycolate phosphatase  29.7 
 
 
227 aa  68.6  0.00000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.40738  normal 
 
 
-
 
NC_010814  Glov_1614  HAD-superfamily hydrolase, subfamily IA, variant 3  26.15 
 
 
224 aa  68.6  0.00000000007  Geobacter lovleyi SZ  Bacteria  normal  0.0147527  n/a   
 
 
-
 
NC_011059  Paes_0473  HAD-superfamily hydrolase, subfamily IA, variant 3  31.25 
 
 
211 aa  68.2  0.00000000008  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.0000148872  normal 
 
 
-
 
NC_008255  CHU_1830  phosphatase  27.12 
 
 
204 aa  68.2  0.00000000008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0401626 
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  27.37 
 
 
456 aa  68.2  0.00000000009  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_005945  BAS4107  HAD superfamily hydrolase  26.82 
 
 
221 aa  68.2  0.00000000009  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4427  HAD superfamily hydrolase  26.82 
 
 
221 aa  68.2  0.00000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2463  HAD family hydrolase  26.96 
 
 
209 aa  68.2  0.00000000009  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
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