More than 300 homologs were found in PanDaTox collection
for query gene Rpic_1760 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1760  two component heavy metal response transcriptional regulator, winged helix family  100 
 
 
225 aa  451  1e-126  Ralstonia pickettii 12J  Bacteria  normal  0.133831  normal  0.402692 
 
 
-
 
NC_007971  Rmet_5978  regulatory protein CzcR  99.11 
 
 
225 aa  447  1e-125  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  2.69255e-05  normal  0.0723212 
 
 
-
 
NC_010623  Bphy_3962  two component heavy metal response transcriptional regulator  70.45 
 
 
225 aa  313  1e-84  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5988  two component heavy metal response transcriptional regulator  67.86 
 
 
225 aa  311  5e-84  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0489  response regulator for cobalt zinc cadmium resistance transcription regulator protein  67.73 
 
 
224 aa  311  5e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5744  two component heavy metal response transcriptional regulator  67.41 
 
 
225 aa  310  1e-83  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0360294  normal  0.749662 
 
 
-
 
NC_008544  Bcen2424_6324  two component heavy metal response transcriptional regulator  68.02 
 
 
225 aa  308  5e-83  Burkholderia cenocepacia HI2424  Bacteria  normal  0.313253  normal 
 
 
-
 
NC_008060  Bcen_1505  two component heavy metal response transcriptional regulator  68.02 
 
 
225 aa  308  5e-83  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.228186  n/a   
 
 
-
 
NC_010512  Bcenmc03_6987  two component heavy metal response transcriptional regulator  68.02 
 
 
225 aa  308  5e-83  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.67799  normal  0.586494 
 
 
-
 
NC_010676  Bphyt_5224  two component heavy metal response transcriptional regulator, winged helix family  68.64 
 
 
225 aa  306  1e-82  Burkholderia phytofirmans PsJN  Bacteria  normal  0.57611  normal 
 
 
-
 
NC_007347  Reut_A1815  two component heavy metal response transcriptional regulator  67.27 
 
 
224 aa  307  1e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.275759  n/a   
 
 
-
 
NC_007348  Reut_B3961  heavy metal response regulator  66.82 
 
 
229 aa  305  3e-82  Ralstonia eutropha JMP134  Bacteria  decreased coverage  0.00889091  n/a   
 
 
-
 
NC_007952  Bxe_B1389  two component heavy metal response transcriptional regulator  68.18 
 
 
225 aa  304  8e-82  Burkholderia xenovorans LB400  Bacteria  normal  0.717226  normal  0.091392 
 
 
-
 
NC_007973  Rmet_1751  two component heavy metal response transcriptional regulator  65.45 
 
 
224 aa  302  3e-81  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0784096 
 
 
-
 
NC_007492  Pfl01_0202  two component heavy metal response transcriptional regulator  66.36 
 
 
226 aa  301  4e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5335  two component heavy metal response transcriptional regulator, winged helix family  64.89 
 
 
228 aa  298  4e-80  Ralstonia pickettii 12D  Bacteria  normal  0.733276  normal  0.970872 
 
 
-
 
NC_010682  Rpic_1718  two component heavy metal response transcriptional regulator, winged helix family  64.89 
 
 
228 aa  298  4e-80  Ralstonia pickettii 12J  Bacteria  normal  0.348336  normal 
 
 
-
 
NC_012849  Rpic12D_5099  two component heavy metal response transcriptional regulator, winged helix family  65.2 
 
 
228 aa  296  1e-79  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0773075 
 
 
-
 
NC_010682  Rpic_1780  two component heavy metal response transcriptional regulator, winged helix family  64.89 
 
 
228 aa  296  2e-79  Ralstonia pickettii 12J  Bacteria  normal  0.817023  normal  0.826624 
 
 
-
 
NC_010682  Rpic_1841  two component heavy metal response transcriptional regulator, winged helix family  64.76 
 
 
228 aa  295  5e-79  Ralstonia pickettii 12J  Bacteria  normal  0.99331  hitchhiker  2.22676e-06 
 
 
-
 
NC_011901  Tgr7_1208  two component heavy metal response transcriptional regulator, winged helix family  67.86 
 
 
226 aa  295  5e-79  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3985  two component heavy metal response transcriptional regulator, winged helix family  64.25 
 
 
226 aa  295  6e-79  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1748a  hypothetical protein  62.1 
 
 
223 aa  293  2e-78  Burkholderia xenovorans LB400  Bacteria  normal  0.0697031  normal  0.305387 
 
 
-
 
NC_003296  RSp0655  two component response regulator transcription regulator protein  65.78 
 
 
228 aa  293  2e-78  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.81937 
 
 
-
 
NC_009483  Gura_1986  two component heavy metal response transcriptional regulator  64.71 
 
 
223 aa  292  4e-78  Geobacter uraniireducens Rf4  Bacteria  normal  0.0566795  n/a   
 
 
-
 
NC_007963  Csal_0102  two component heavy metal response transcriptional regulator  63.18 
 
 
223 aa  291  5e-78  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.753235  n/a   
 
 
-
 
NC_010676  Bphyt_4933  two component heavy metal response transcriptional regulator, winged helix family  62.1 
 
 
223 aa  291  7e-78  Burkholderia phytofirmans PsJN  Bacteria  normal  0.461594  normal  0.344735 
 
 
-
 
NC_011662  Tmz1t_4055  two component heavy metal response transcriptional regulator, winged helix family  63.35 
 
 
226 aa  290  1e-77  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3379  two component heavy metal response transcriptional regulator  61.26 
 
 
223 aa  289  3e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1439  transcriptional activator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0402  transcriptional activator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0800763  n/a   
 
 
-
 
NC_009075  BURPS668_A1524  transcriptional activator protein IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1180  transcriptional activator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0831411  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0030  DNA-binding response regulator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia pseudomallei 1710b  Bacteria  normal  0.122488  n/a   
 
 
-
 
NC_008784  BMASAVP1_0010  transcriptional activator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia mallei SAVP1  Bacteria  normal  0.121051  n/a   
 
 
-
 
NC_006349  BMAA1028  DNA-binding response regulator IrlR  63.18 
 
 
229 aa  288  4e-77  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0282692  n/a   
 
 
-
 
NC_007005  Psyr_3374  heavy metal response regulator  61.82 
 
 
229 aa  288  5e-77  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4389  two component heavy metal response transcriptional regulator, winged helix family  63.18 
 
 
226 aa  288  6e-77  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3559  two component heavy metal response transcriptional regulator, winged helix family  61.36 
 
 
225 aa  288  7e-77  Variovorax paradoxus S110  Bacteria  normal  0.710681  n/a   
 
 
-
 
NC_007650  BTH_II1376  DNA-binding response regulator IrlR  62.05 
 
 
229 aa  287  8e-77  Burkholderia thailandensis E264  Bacteria  normal  0.498923  n/a   
 
 
-
 
NC_002939  GSU2946  DNA-binding heavy metal response regulator  62.33 
 
 
223 aa  287  1e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2474  heavy metal response regulator  61.99 
 
 
223 aa  287  1e-76  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0708  two component heavy metal response transcriptional regulator  62.5 
 
 
226 aa  287  1e-76  Burkholderia xenovorans LB400  Bacteria  normal  0.328024  normal  0.9016 
 
 
-
 
NC_004578  PSPTO_3603  DNA-binding heavy metal response regulator  61.36 
 
 
229 aa  285  3e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.203952  n/a   
 
 
-
 
NC_007511  Bcep18194_B2430  two component heavy metal response transcriptional regulator  61.82 
 
 
227 aa  285  3e-76  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3722  two component heavy metal response transcriptional regulator, winged helix family  61.99 
 
 
223 aa  285  3e-76  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3842  two component heavy metal response transcriptional regulator  60.71 
 
 
227 aa  285  4e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.67414 
 
 
-
 
NC_008061  Bcen_4683  two component heavy metal response transcriptional regulator  60.71 
 
 
228 aa  285  4e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.222547  n/a   
 
 
-
 
NC_008543  Bcen2424_3680  two component heavy metal response transcriptional regulator  60.71 
 
 
228 aa  285  4e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  0.224842  normal 
 
 
-
 
NC_008463  PA14_45880  putative two-component response regulator  60.18 
 
 
229 aa  284  8e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.954426 
 
 
-
 
NC_007298  Daro_2259  two component heavy metal response transcriptional regulator  62.61 
 
 
225 aa  283  1e-75  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010070  Bmul_6173  two component heavy metal response transcriptional regulator  60.71 
 
 
228 aa  284  1e-75  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.400074 
 
 
-
 
NC_011071  Smal_2165  two component heavy metal response transcriptional regulator, winged helix family  62.56 
 
 
232 aa  283  2e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.77286 
 
 
-
 
NC_007517  Gmet_0528  two component heavy metal response transcriptional regulator  61.99 
 
 
223 aa  282  3e-75  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4106  two component heavy metal response transcriptional regulator  59.09 
 
 
223 aa  282  3e-75  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.971428 
 
 
-
 
NC_009656  PSPA7_5607  two-component response regulator  63.64 
 
 
229 aa  281  5e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1461  two component heavy metal response transcriptional regulator  64 
 
 
227 aa  281  5e-75  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0422  two component heavy metal response transcriptional regulator  63.51 
 
 
227 aa  281  6e-75  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5186  two component heavy metal response transcriptional regulator  58.18 
 
 
223 aa  281  6e-75  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_64570  two-component response regulator  63.18 
 
 
229 aa  281  6e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4757  two component heavy metal response transcriptional regulator  58.64 
 
 
223 aa  280  1e-74  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0878196  n/a   
 
 
-
 
NC_009656  PSPA7_3892  putative two-component response regulator  58.82 
 
 
229 aa  280  1e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3410  two component heavy metal response transcriptional regulator  58.64 
 
 
223 aa  280  1e-74  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0344  two component heavy metal response transcriptional regulator  58.37 
 
 
231 aa  280  1e-74  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1174  two component heavy metal response transcriptional regulator  61.54 
 
 
224 aa  279  2e-74  Pseudomonas mendocina ymp  Bacteria  normal  0.216853  normal 
 
 
-
 
NC_010552  BamMC406_3349  two component heavy metal response transcriptional regulator  57.73 
 
 
223 aa  280  2e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3615  two component heavy metal response transcriptional regulator, winged helix family  61.54 
 
 
224 aa  279  3e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3720  two component heavy metal response transcriptional regulator, winged helix family  61.54 
 
 
224 aa  278  3e-74  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007953  Bxe_C1381  two component heavy metal response transcriptional regulator  60.09 
 
 
224 aa  278  4e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.961918 
 
 
-
 
NC_007492  Pfl01_3624  two component heavy metal response transcriptional regulator  60.63 
 
 
224 aa  278  5e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2348  putative two-component response regulator  61.71 
 
 
228 aa  278  5e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_002947  PP_5383  two component heavy metal response transcriptional regulator  60 
 
 
225 aa  277  8e-74  Pseudomonas putida KT2440  Bacteria  normal  normal  0.651671 
 
 
-
 
NC_010084  Bmul_2337  two component heavy metal response transcriptional regulator  61.71 
 
 
227 aa  276  1e-73  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0019  two component heavy metal response transcriptional regulator  60.44 
 
 
225 aa  276  1e-73  Pseudomonas putida GB-1  Bacteria  normal  0.593373  normal 
 
 
-
 
NC_010501  PputW619_0017  two component heavy metal response transcriptional regulator  60.44 
 
 
225 aa  276  1e-73  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1438  DNA-binding response regulator CzrR  60.18 
 
 
224 aa  277  1e-73  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_5178  two component heavy metal response transcriptional regulator  59.91 
 
 
225 aa  277  1e-73  Pseudomonas putida W619  Bacteria  normal  0.341313  normal 
 
 
-
 
NC_009512  Pput_0017  two component heavy metal response transcriptional regulator  60.44 
 
 
225 aa  276  1e-73  Pseudomonas putida F1  Bacteria  normal  normal  0.0468746 
 
 
-
 
NC_009512  Pput_4283  two component heavy metal response transcriptional regulator  60.18 
 
 
224 aa  277  1e-73  Pseudomonas putida F1  Bacteria  normal  0.0230752  normal 
 
 
-
 
NC_007912  Sde_1948  response regulator receiver domain-containing protein  62.05 
 
 
226 aa  277  1e-73  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.679676 
 
 
-
 
NC_008463  PA14_27810  putative two-component response regulator  61.26 
 
 
226 aa  277  1e-73  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0451  two component heavy metal response transcriptional regulator  60.81 
 
 
230 aa  276  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1498  two component heavy metal response transcriptional regulator  62.9 
 
 
223 aa  276  2e-73  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_001641  putative two component response regulator transcription regulator protein  58.22 
 
 
230 aa  276  2e-73  Vibrio sp. Ex25  Bacteria  normal  0.170142  n/a   
 
 
-
 
NC_010002  Daci_1091  two component heavy metal response transcriptional regulator  59.56 
 
 
232 aa  276  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4800  heavy metal response regulator  58.82 
 
 
224 aa  276  3e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00185939 
 
 
-
 
NC_010322  PputGB1_4369  two component heavy metal response transcriptional regulator  59.73 
 
 
224 aa  276  3e-73  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0732935 
 
 
-
 
NC_010070  Bmul_6295  two component heavy metal response transcriptional regulator  58.64 
 
 
223 aa  275  4e-73  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.803537  normal  0.219108 
 
 
-
 
NC_008825  Mpe_A1629  two-component response regulator  59.82 
 
 
228 aa  275  4e-73  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.128663 
 
 
-
 
NC_007347  Reut_A2490  heavy metal response regulator  64 
 
 
228 aa  275  4e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.289616  n/a   
 
 
-
 
NC_010682  Rpic_1742  two component heavy metal response transcriptional regulator, winged helix family  62.11 
 
 
228 aa  275  6e-73  Ralstonia pickettii 12J  Bacteria  normal  normal  0.595604 
 
 
-
 
NC_010322  PputGB1_0836  two component heavy metal response transcriptional regulator  56.7 
 
 
224 aa  274  7e-73  Pseudomonas putida GB-1  Bacteria  normal  0.368612  normal 
 
 
-
 
NC_011992  Dtpsy_2201  two component heavy metal response transcriptional regulator, winged helix family  62.67 
 
 
227 aa  274  8e-73  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3258  two component heavy metal response transcriptional regulator  58.48 
 
 
238 aa  274  9e-73  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00206307  normal  0.0675777 
 
 
-
 
NC_007404  Tbd_1749  two component heavy metal response transcriptional regulator  61.71 
 
 
242 aa  274  9e-73  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4465  two component heavy metal response transcriptional regulator, winged helix family  64.22 
 
 
206 aa  274  9e-73  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0436659 
 
 
-
 
NC_007650  BTH_II0376  DNA-binding response regulator IrlR  58.48 
 
 
230 aa  274  9e-73  Burkholderia thailandensis E264  Bacteria  normal  0.083776  n/a   
 
 
-
 
NC_010501  PputW619_4391  two component heavy metal response transcriptional regulator  56.7 
 
 
224 aa  273  1e-72  Pseudomonas putida W619  Bacteria  normal  normal  0.593256 
 
 
-
 
NC_007492  Pfl01_3855  two component heavy metal response transcriptional regulator  59.01 
 
 
226 aa  273  1e-72  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.845216 
 
 
-
 
NC_004578  PSPTO_0378  DNA-binding heavy metal response regulator  58.37 
 
 
224 aa  273  2e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
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