More than 300 homologs were found in PanDaTox collection
for query gene Rpic_0124 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc0274  putative acyl CoA dehydrogenase oxidoreductase protein  94.15 
 
 
376 aa  702    Ralstonia solanacearum GMI1000  Bacteria  normal  0.0244917  normal 
 
 
-
 
NC_012856  Rpic12D_0132  acyl-CoA dehydrogenase domain protein  98.67 
 
 
376 aa  762    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  90.69 
 
 
376 aa  683    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  100 
 
 
376 aa  771    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  81.07 
 
 
376 aa  640    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  79.73 
 
 
376 aa  635    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  90.4 
 
 
376 aa  677    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  78.72 
 
 
376 aa  615  1e-175  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  75.8 
 
 
376 aa  602  1.0000000000000001e-171  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3052  acyl-CoA dehydrogenase domain protein  75.53 
 
 
376 aa  600  1e-170  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3838  acyl-CoA dehydrogenase-like  74.73 
 
 
376 aa  599  1e-170  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4207  acyl-CoA dehydrogenase domain-containing protein  77.66 
 
 
376 aa  592  1e-168  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000498045 
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  73.94 
 
 
376 aa  592  1e-168  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4365  acyl-CoA dehydrogenase domain-containing protein  75.27 
 
 
376 aa  592  1e-168  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  73.14 
 
 
377 aa  585  1e-166  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  72.34 
 
 
376 aa  582  1.0000000000000001e-165  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0176  acyl-CoA dehydrogenase domain-containing protein  80.32 
 
 
376 aa  571  1.0000000000000001e-162  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  72.87 
 
 
376 aa  569  1e-161  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  68.09 
 
 
378 aa  549  1e-155  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  64.8 
 
 
375 aa  505  9.999999999999999e-143  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  64.27 
 
 
375 aa  502  1e-141  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  64.53 
 
 
375 aa  502  1e-141  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  65.33 
 
 
375 aa  498  1e-140  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  65.33 
 
 
375 aa  499  1e-140  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  64.53 
 
 
375 aa  495  1e-139  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  63.73 
 
 
375 aa  492  9.999999999999999e-139  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  62.67 
 
 
375 aa  491  1e-137  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_011894  Mnod_3635  acyl-CoA dehydrogenase domain protein  65.24 
 
 
376 aa  483  1e-135  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3936  acyl-CoA dehydrogenase domain-containing protein  66.04 
 
 
376 aa  477  1e-133  Methylobacterium sp. 4-46  Bacteria  normal  0.132156  decreased coverage  0.00760667 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  61.33 
 
 
375 aa  474  1e-132  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  60.8 
 
 
375 aa  471  1e-132  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  63.2 
 
 
375 aa  470  1.0000000000000001e-131  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  61.87 
 
 
375 aa  468  1.0000000000000001e-131  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  61.87 
 
 
375 aa  465  9.999999999999999e-131  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  63.2 
 
 
375 aa  463  1e-129  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_007958  RPD_3106  acyl-CoA dehydrogenase-like  62.67 
 
 
375 aa  463  1e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0271451 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  62.93 
 
 
375 aa  463  1e-129  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  60.27 
 
 
377 aa  454  1e-127  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  61.87 
 
 
375 aa  455  1e-127  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  60 
 
 
377 aa  451  1.0000000000000001e-126  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  58.67 
 
 
377 aa  448  1e-125  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  59.2 
 
 
377 aa  451  1e-125  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  59.2 
 
 
377 aa  451  1e-125  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  59.2 
 
 
377 aa  451  1e-125  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  59.2 
 
 
377 aa  447  1.0000000000000001e-124  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  58.29 
 
 
378 aa  436  1e-121  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  57.91 
 
 
377 aa  431  1e-119  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_007494  RSP_3182  Acyl-CoA dehydrogenase  61.07 
 
 
377 aa  429  1e-119  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  57.91 
 
 
377 aa  431  1e-119  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_010623  Bphy_5126  acyl-CoA dehydrogenase domain-containing protein  57.37 
 
 
377 aa  426  1e-118  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393324 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  57.37 
 
 
377 aa  424  1e-118  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3574  putative acyl-CoA dehydrogenase  56.95 
 
 
377 aa  426  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3919  acyl-CoA dehydrogenase domain-containing protein  60.53 
 
 
377 aa  426  1e-118  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0604342  normal 
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  54.42 
 
 
383 aa  423  1e-117  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  55.76 
 
 
383 aa  422  1e-117  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  55.23 
 
 
383 aa  421  1e-116  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  56.18 
 
 
377 aa  420  1e-116  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  55.5 
 
 
383 aa  421  1e-116  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05570  acyl-CoA dehydrogenase oxidoreductase protein  59.52 
 
 
377 aa  416  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.213032 
 
 
-
 
NC_007492  Pfl01_2865  Acyl-CoA dehydrogenase-like  54.81 
 
 
383 aa  417  9.999999999999999e-116  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0509295  normal  0.212771 
 
 
-
 
NC_009511  Swit_3603  acyl-CoA dehydrogenase domain-containing protein  57.33 
 
 
375 aa  414  9.999999999999999e-116  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.323372 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  55.5 
 
 
383 aa  417  9.999999999999999e-116  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  56.57 
 
 
377 aa  414  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  53.08 
 
 
380 aa  410  1e-113  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_004578  PSPTO_3706  acyl-CoA dehydrogenase  55.76 
 
 
383 aa  405  1.0000000000000001e-112  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_10680  acyl-CoA dehydrogenase  55.88 
 
 
383 aa  405  1.0000000000000001e-112  Azotobacter vinelandii DJ  Bacteria  normal  0.270304  n/a   
 
 
-
 
NC_007650  BTH_II1803  acyl-CoA dehydrogenase  55.47 
 
 
377 aa  400  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  0.545777  n/a   
 
 
-
 
NC_010676  Bphyt_5108  acyl-CoA dehydrogenase domain protein  52.67 
 
 
381 aa  398  9.999999999999999e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  0.671033  normal 
 
 
-
 
NC_009075  BURPS668_A0918  acyl-CoA dehydrogenase  55.73 
 
 
377 aa  400  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  0.993966  n/a   
 
 
-
 
NC_007005  Psyr_1769  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  55.23 
 
 
383 aa  398  1e-109  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A2178  acyl-CoA dehydrogenase  55.2 
 
 
377 aa  397  1e-109  Burkholderia pseudomallei 1710b  Bacteria  normal  0.480909  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  51.47 
 
 
382 aa  395  1e-109  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_009078  BURPS1106A_A0826  acyl-CoA dehydrogenase  55.2 
 
 
377 aa  397  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2192  acyl-CoA dehydrogenase domain protein  53.78 
 
 
380 aa  389  1e-107  Anaeromyxobacter sp. K  Bacteria  normal  0.516178  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  50.67 
 
 
379 aa  389  1e-107  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_011891  A2cp1_2281  acyl-CoA dehydrogenase domain protein  54.05 
 
 
380 aa  389  1e-107  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  51.87 
 
 
380 aa  385  1e-106  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_1665  butyryl-CoA dehydrogenase  53.51 
 
 
380 aa  384  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  51.34 
 
 
380 aa  382  1e-105  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  48.26 
 
 
381 aa  379  1e-104  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  48.26 
 
 
376 aa  380  1e-104  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  47.99 
 
 
376 aa  379  1e-104  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  48.26 
 
 
381 aa  381  1e-104  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  47.72 
 
 
376 aa  378  1e-104  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  47.99 
 
 
376 aa  379  1e-104  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  51.47 
 
 
377 aa  380  1e-104  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
379 aa  380  1e-104  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  49.47 
 
 
394 aa  379  1e-104  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  48.53 
 
 
376 aa  379  1e-104  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
376 aa  381  1e-104  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  48.26 
 
 
381 aa  381  1e-104  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  48.66 
 
 
379 aa  381  1e-104  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  47.45 
 
 
376 aa  375  1e-103  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  47.99 
 
 
379 aa  376  1e-103  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  47.45 
 
 
376 aa  375  1e-103  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  48.26 
 
 
379 aa  375  1e-103  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  47.99 
 
 
379 aa  372  1e-102  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  48.26 
 
 
379 aa  374  1e-102  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  47.99 
 
 
379 aa  372  1e-102  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  48.93 
 
 
379 aa  375  1e-102  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
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