4 homologs were found in PanDaTox collection
for query gene Rpic12D_4729 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012855  Rpic12D_4729  hypothetical protein  100 
 
 
137 aa  289  7e-78  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0039354  normal  0.208766 
 
 
-
 
NC_010682  Rpic_3185  hypothetical protein  83.78 
 
 
170 aa  142  1e-33  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00000762483 
 
 
-
 
NC_012856  Rpic12D_2833  hypothetical protein  81.08 
 
 
170 aa  137  3.9999999999999997e-32  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2508  hypothetical protein  35.9 
 
 
104 aa  63.9  0.0000000008  Polaromonas sp. JS666  Bacteria  normal  0.240987  normal  0.107896 
 
 
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