More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_2632 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  89.3 
 
 
515 aa  896    Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  65.69 
 
 
627 aa  636    Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  65.69 
 
 
544 aa  637    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
515 aa  1030    Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  66.01 
 
 
611 aa  636    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  99.81 
 
 
515 aa  1028    Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
545 aa  630  1e-179  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  65.11 
 
 
521 aa  625  1e-178  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
545 aa  627  1e-178  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
545 aa  627  1e-178  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  65.11 
 
 
521 aa  624  1e-177  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
549 aa  616  1e-175  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  63.74 
 
 
546 aa  612  9.999999999999999e-175  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  63.74 
 
 
546 aa  612  9.999999999999999e-175  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  63.74 
 
 
546 aa  612  9.999999999999999e-175  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  63.74 
 
 
546 aa  612  9.999999999999999e-175  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  63.94 
 
 
546 aa  613  9.999999999999999e-175  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  66.47 
 
 
513 aa  610  1e-173  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  66.39 
 
 
598 aa  603  1.0000000000000001e-171  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.11 
 
 
513 aa  592  1e-168  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  65.11 
 
 
513 aa  592  1e-168  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  63.89 
 
 
526 aa  590  1e-167  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  64.02 
 
 
512 aa  575  1.0000000000000001e-163  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
520 aa  572  1.0000000000000001e-162  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  63.81 
 
 
511 aa  568  1e-160  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  59.85 
 
 
520 aa  557  1e-157  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
519 aa  526  1e-148  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  52.43 
 
 
585 aa  520  1e-146  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
519 aa  518  1e-146  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
519 aa  510  1e-143  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  54.37 
 
 
518 aa  504  1e-141  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
515 aa  497  1e-139  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
514 aa  498  1e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
513 aa  493  9.999999999999999e-139  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
542 aa  483  1e-135  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.63 
 
 
618 aa  480  1e-134  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
513 aa  476  1e-133  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
621 aa  474  1e-132  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  51.66 
 
 
629 aa  471  1.0000000000000001e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  50.79 
 
 
513 aa  466  9.999999999999999e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  80.35 
 
 
634 aa  464  1e-129  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  80.35 
 
 
634 aa  464  1e-129  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  50.49 
 
 
517 aa  463  1e-129  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  50.49 
 
 
517 aa  463  1e-129  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.76 
 
 
566 aa  459  9.999999999999999e-129  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  50.39 
 
 
542 aa  456  1e-127  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  50.19 
 
 
517 aa  455  1e-127  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  50.39 
 
 
517 aa  451  1e-125  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
544 aa  451  1e-125  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  50 
 
 
517 aa  450  1e-125  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  49.22 
 
 
517 aa  445  1.0000000000000001e-124  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
519 aa  446  1.0000000000000001e-124  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  49.03 
 
 
518 aa  445  1.0000000000000001e-124  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
541 aa  445  1.0000000000000001e-124  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
541 aa  445  1.0000000000000001e-124  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
517 aa  445  1e-123  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  48.45 
 
 
585 aa  435  1e-121  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  52.83 
 
 
464 aa  434  1e-120  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.06 
 
 
532 aa  429  1e-119  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  48.07 
 
 
587 aa  431  1e-119  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
541 aa  430  1e-119  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
584 aa  430  1e-119  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  51.05 
 
 
482 aa  425  1e-117  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.23 
 
 
584 aa  424  1e-117  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  73.55 
 
 
594 aa  416  9.999999999999999e-116  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  80.55 
 
 
615 aa  416  9.999999999999999e-116  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  74.19 
 
 
522 aa  417  9.999999999999999e-116  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  80.55 
 
 
615 aa  416  9.999999999999999e-116  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  74.19 
 
 
522 aa  417  9.999999999999999e-116  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  47.22 
 
 
524 aa  412  1e-114  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  80.41 
 
 
524 aa  410  1e-113  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  45.54 
 
 
521 aa  410  1e-113  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  45.54 
 
 
521 aa  410  1e-113  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  45.54 
 
 
521 aa  410  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  82.81 
 
 
600 aa  407  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
545 aa  407  1.0000000000000001e-112  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.55 
 
 
579 aa  402  1e-111  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  73.79 
 
 
608 aa  402  9.999999999999999e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  46.67 
 
 
485 aa  397  1e-109  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  46.67 
 
 
485 aa  397  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  46.36 
 
 
598 aa  398  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  71.64 
 
 
608 aa  394  1e-108  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  71.64 
 
 
608 aa  394  1e-108  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
613 aa  389  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.29 
 
 
529 aa  389  1e-107  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  68.95 
 
 
559 aa  387  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.9 
 
 
512 aa  387  1e-106  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.13 
 
 
564 aa  387  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  64.37 
 
 
558 aa  388  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.17 
 
 
519 aa  384  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  47.78 
 
 
456 aa  383  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.98 
 
 
519 aa  380  1e-104  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  63.47 
 
 
573 aa  382  1e-104  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
576 aa  380  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.47 
 
 
517 aa  376  1e-103  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
579 aa  377  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  60.24 
 
 
579 aa  375  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.01 
 
 
584 aa  374  1e-102  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  67.87 
 
 
553 aa  369  1e-101  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  63.53 
 
 
581 aa  369  1e-101  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
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