More than 300 homologs were found in PanDaTox collection
for query gene Rpal_3710 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_3408  acyl-CoA dehydrogenase domain-containing protein  76.4 
 
 
416 aa  650    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.288256 
 
 
-
 
NC_011004  Rpal_3710  acyl-CoA dehydrogenase domain protein  100 
 
 
410 aa  851    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5105  putative acyl-CoA dehydrogenase  87.22 
 
 
411 aa  746    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.117324  normal 
 
 
-
 
NC_007778  RPB_2260  Acyl-CoA dehydrogenase-like  90.73 
 
 
410 aa  786    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.716497  normal 
 
 
-
 
NC_011894  Mnod_4413  acyl-CoA dehydrogenase domain protein  78.35 
 
 
416 aa  666    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3482  acyl-CoA dehydrogenase-like  87.53 
 
 
412 aa  750    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.468948  normal 
 
 
-
 
NC_007958  RPD_3210  acyl-CoA dehydrogenase-like  91.18 
 
 
412 aa  786    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4071  acyl-CoA dehydrogenase domain-containing protein  74.41 
 
 
435 aa  634    Caulobacter sp. K31  Bacteria  normal  0.796967  normal 
 
 
-
 
NC_008048  Sala_3074  acyl-CoA dehydrogenase-like protein  72.6 
 
 
429 aa  617  1e-176  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1819  acyl-CoA dehydrogenase domain-containing protein  73.35 
 
 
411 aa  615  1e-175  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0206829 
 
 
-
 
NC_007794  Saro_0996  acyl-CoA dehydrogenase-like  71.43 
 
 
430 aa  610  1e-173  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.286949  n/a   
 
 
-
 
NC_009719  Plav_0646  acyl-CoA dehydrogenase domain-containing protein  68.86 
 
 
412 aa  572  1.0000000000000001e-162  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  65.02 
 
 
401 aa  539  9.999999999999999e-153  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1777  acyl-CoA dehydrogenase domain-containing protein  63.02 
 
 
424 aa  535  1e-151  Acidovorax sp. JS42  Bacteria  normal  0.314845  normal 
 
 
-
 
NC_011992  Dtpsy_1945  acyl-CoA dehydrogenase domain protein  63.26 
 
 
424 aa  535  1e-151  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2961  acyl-CoA dehydrogenase-like  65.53 
 
 
419 aa  533  1e-150  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2399  acyl-CoA dehydrogenase-like  63.43 
 
 
412 aa  527  1e-148  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.137171  n/a   
 
 
-
 
NC_008752  Aave_3077  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
424 aa  522  1e-147  Acidovorax citrulli AAC00-1  Bacteria  normal  0.765136  normal  0.228122 
 
 
-
 
NC_008781  Pnap_1911  acyl-CoA dehydrogenase domain-containing protein  64.3 
 
 
419 aa  521  1e-147  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.117323  normal 
 
 
-
 
NC_007908  Rfer_3328  acyl-CoA dehydrogenase-like  62.38 
 
 
416 aa  523  1e-147  Rhodoferax ferrireducens T118  Bacteria  normal  0.520188  n/a   
 
 
-
 
NC_007973  Rmet_0968  acyl-CoA dehydrogenase-like protein  64.3 
 
 
420 aa  522  1e-147  Cupriavidus metallidurans CH34  Bacteria  normal  0.0487857  normal  0.0424234 
 
 
-
 
NC_007347  Reut_A1002  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  63.33 
 
 
420 aa  518  1.0000000000000001e-145  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1083  acyl-CoA dehydrogenase domain-containing protein  63.17 
 
 
408 aa  515  1.0000000000000001e-145  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  63.39 
 
 
405 aa  517  1.0000000000000001e-145  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  62.5 
 
 
412 aa  515  1.0000000000000001e-145  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_008825  Mpe_A1953  putative acyl-CoA dehydrogenase family protein  61.93 
 
 
415 aa  512  1e-144  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.134016 
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  63.21 
 
 
409 aa  511  1e-144  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_013440  Hoch_4197  acyl-CoA dehydrogenase domain protein  64.36 
 
 
405 aa  514  1e-144  Haliangium ochraceum DSM 14365  Bacteria  normal  0.62553  normal  0.93763 
 
 
-
 
NC_012791  Vapar_2628  acyl-CoA dehydrogenase domain protein  61.95 
 
 
423 aa  513  1e-144  Variovorax paradoxus S110  Bacteria  normal  0.122301  n/a   
 
 
-
 
NC_013411  GYMC61_1801  acyl-CoA dehydrogenase domain protein  63.64 
 
 
403 aa  513  1e-144  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  63.21 
 
 
409 aa  513  1e-144  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  63.21 
 
 
409 aa  513  1e-144  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_009080  BMA10247_0436  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
408 aa  509  1e-143  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1854  acyl-CoA dehydrogenase domain protein  63.08 
 
 
419 aa  511  1e-143  Ralstonia pickettii 12D  Bacteria  normal  0.505719  normal  0.0689875 
 
 
-
 
NC_003295  RSc2020  acyl-CoA dehydrogenase oxidoreductase protein  63.57 
 
 
420 aa  509  1e-143  Ralstonia solanacearum GMI1000  Bacteria  normal  0.245052  normal  0.152176 
 
 
-
 
NC_006348  BMA1806  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
408 aa  509  1e-143  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0379201  n/a   
 
 
-
 
NC_007434  BURPS1710b_1459  acyl-CoA dehydrogenase domain-containing protein  62.68 
 
 
408 aa  510  1e-143  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1322  acyl-CoA dehydrogenase domain-containing protein  62.68 
 
 
408 aa  510  1e-143  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2177  acyl-CoA dehydrogenase domain protein  62.84 
 
 
419 aa  509  1e-143  Ralstonia pickettii 12J  Bacteria  normal  0.556942  normal  0.0164112 
 
 
-
 
NC_008785  BMASAVP1_A1153  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
408 aa  509  1e-143  Burkholderia mallei SAVP1  Bacteria  normal  0.0557082  n/a   
 
 
-
 
NC_009074  BURPS668_1313  acyl-CoA dehydrogenase domain-containing protein  62.68 
 
 
408 aa  510  1e-143  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0715  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
408 aa  509  1e-143  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  61.98 
 
 
409 aa  504  9.999999999999999e-143  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  61.76 
 
 
409 aa  507  9.999999999999999e-143  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  61.98 
 
 
409 aa  505  9.999999999999999e-143  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_010002  Daci_3285  acyl-CoA dehydrogenase domain-containing protein  60.49 
 
 
424 aa  508  9.999999999999999e-143  Delftia acidovorans SPH-1  Bacteria  normal  0.64464  normal  0.6296 
 
 
-
 
NC_007951  Bxe_A3188  putative acyl-CoA dehydrogenase oxidoreductase  61.89 
 
 
419 aa  507  9.999999999999999e-143  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6158  acyl-CoA dehydrogenase domain protein  62.5 
 
 
410 aa  506  9.999999999999999e-143  Variovorax paradoxus S110  Bacteria  normal  0.870392  n/a   
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  61.98 
 
 
414 aa  504  1e-141  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4306  acyl-CoA dehydrogenase domain-containing protein  59.61 
 
 
424 aa  503  1e-141  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.530471  normal 
 
 
-
 
NC_010681  Bphyt_1367  acyl-CoA dehydrogenase domain protein  60.92 
 
 
419 aa  501  1e-141  Burkholderia phytofirmans PsJN  Bacteria  normal  0.44038  hitchhiker  0.00184571 
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  60.99 
 
 
409 aa  501  1e-141  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_009484  Acry_2113  acyl-CoA dehydrogenase domain-containing protein  61.12 
 
 
426 aa  500  1e-140  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  61.23 
 
 
409 aa  499  1e-140  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  61.23 
 
 
409 aa  499  1e-140  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1987  acyl-CoA dehydrogenase domain-containing protein  61.02 
 
 
412 aa  498  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  58.74 
 
 
407 aa  478  1e-133  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  57.91 
 
 
403 aa  465  9.999999999999999e-131  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_008228  Patl_1812  acyl-CoA dehydrogenase-like  56.55 
 
 
408 aa  467  9.999999999999999e-131  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2860  acyl-CoA dehydrogenase domain-containing protein  57.75 
 
 
432 aa  462  1e-129  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  58.05 
 
 
403 aa  459  9.999999999999999e-129  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  58.29 
 
 
402 aa  459  9.999999999999999e-129  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_008740  Maqu_2205  acyl-CoA dehydrogenase domain-containing protein  55.77 
 
 
403 aa  460  9.999999999999999e-129  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0734  acyl-CoA dehydrogenase domain-containing protein  58.35 
 
 
418 aa  458  9.999999999999999e-129  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.998726  normal 
 
 
-
 
NC_013093  Amir_3461  acyl-CoA dehydrogenase domain protein  57.8 
 
 
402 aa  455  1e-127  Actinosynnema mirum DSM 43827  Bacteria  normal  0.274426  n/a   
 
 
-
 
NC_013739  Cwoe_4008  acyl-CoA dehydrogenase domain protein  58.09 
 
 
402 aa  456  1e-127  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0116  acyl-CoA dehydrogenase domain-containing protein  57.63 
 
 
447 aa  452  1.0000000000000001e-126  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01061  putative acyl-CoA dehydrogenase  55.67 
 
 
411 aa  450  1e-125  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2069  acyl-CoA dehydrogenase domain-containing protein  55.8 
 
 
403 aa  449  1e-125  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  56.86 
 
 
398 aa  441  1e-123  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  57.32 
 
 
414 aa  443  1e-123  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_007794  Saro_2511  acyl-CoA dehydrogenase-like  54.68 
 
 
408 aa  443  1e-123  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  56.3 
 
 
407 aa  444  1e-123  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_013947  Snas_2907  acyl-CoA dehydrogenase domain-containing protein  56.19 
 
 
405 aa  439  9.999999999999999e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.227145  normal  0.172894 
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  56.86 
 
 
400 aa  439  9.999999999999999e-123  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  53.38 
 
 
407 aa  440  9.999999999999999e-123  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_014165  Tbis_2866  acyl-CoA dehydrogenase domain-containing protein  56.62 
 
 
401 aa  441  9.999999999999999e-123  Thermobispora bispora DSM 43833  Bacteria  normal  0.511671  normal 
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  56.72 
 
 
411 aa  438  9.999999999999999e-123  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1151  acyl-CoA dehydrogenase domain protein  57.14 
 
 
402 aa  440  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.73028  normal 
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  56.82 
 
 
414 aa  436  1e-121  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_008705  Mkms_0107  acyl-CoA dehydrogenase domain-containing protein  56.51 
 
 
433 aa  437  1e-121  Mycobacterium sp. KMS  Bacteria  normal  normal  0.363073 
 
 
-
 
NC_009077  Mjls_0088  acyl-CoA dehydrogenase domain-containing protein  56.51 
 
 
433 aa  437  1e-121  Mycobacterium sp. JLS  Bacteria  normal  normal  0.403775 
 
 
-
 
NC_014158  Tpau_1860  acyl-CoA dehydrogenase domain protein  54.96 
 
 
407 aa  435  1e-121  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.51043  n/a   
 
 
-
 
NC_009355  OSTLU_40224  predicted protein  54.89 
 
 
461 aa  436  1e-121  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  56.82 
 
 
414 aa  437  1e-121  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_008146  Mmcs_0098  acyl-CoA dehydrogenase-like protein  56.51 
 
 
433 aa  437  1e-121  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2214  acyl-CoA dehydrogenase domain-containing protein  52.31 
 
 
406 aa  437  1e-121  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  56.82 
 
 
414 aa  437  1e-121  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_008784  BMASAVP1_1425  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2654  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia pseudomallei 668  Bacteria  normal  0.798102  n/a   
 
 
-
 
NC_006349  BMAA0242  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0947  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0278  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia mallei NCTC 10247  Bacteria  normal  0.880803  n/a   
 
 
-
 
NC_009565  TBFG_10155  acyl-CoA dehydrogenase fadE2  55.83 
 
 
403 aa  432  1e-120  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2811  acyl-CoA dehydrogenase-like  52.52 
 
 
411 aa  433  1e-120  Jannaschia sp. CCS1  Bacteria  normal  0.368156  normal 
 
 
-
 
NC_013441  Gbro_1247  acyl-CoA dehydrogenase domain protein  53.01 
 
 
416 aa  433  1e-120  Gordonia bronchialis DSM 43247  Bacteria  normal  0.820001  n/a   
 
 
-
 
NC_008835  BMA10229_1622  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia mallei NCTC 10229  Bacteria  normal  0.778123  n/a   
 
 
-
 
NC_008228  Patl_0635  acyl-CoA dehydrogenase-like  53.64 
 
 
406 aa  434  1e-120  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  56.33 
 
 
414 aa  431  1e-120  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2516  acyl-CoA dehydrogenase domain-containing protein  55.1 
 
 
410 aa  433  1e-120  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
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