11 homologs were found in PanDaTox collection
for query gene Rpal_2421 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2421  hypothetical protein  100 
 
 
73 aa  149  2e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3220  hypothetical protein  71.43 
 
 
63 aa  86.7  1e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.318816  normal 
 
 
-
 
NC_011004  Rpal_1615  hypothetical protein  74.07 
 
 
63 aa  85.5  2e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.180845  n/a   
 
 
-
 
NC_007778  RPB_1035  hypothetical protein  69.64 
 
 
66 aa  78.6  0.00000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2219  hypothetical protein  47.37 
 
 
63 aa  50.8  0.000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0200525 
 
 
-
 
NC_011004  Rpal_0011  hypothetical protein  54.72 
 
 
69 aa  49.7  0.00001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0894998  n/a   
 
 
-
 
NC_011666  Msil_0173  hypothetical protein  43.75 
 
 
117 aa  48.5  0.00003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_0739  hypothetical protein  47.17 
 
 
74 aa  45.4  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0008  hypothetical protein  47.17 
 
 
92 aa  44.3  0.0006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.791262  normal 
 
 
-
 
NC_010511  M446_3019  hypothetical protein  48.08 
 
 
64 aa  43.1  0.001  Methylobacterium sp. 4-46  Bacteria  normal  0.189985  normal  0.0594421 
 
 
-
 
NC_011894  Mnod_5112  hypothetical protein  43.14 
 
 
65 aa  40.8  0.007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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