17 homologs were found in PanDaTox collection
for query gene Rpal_2100 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_2100  hypothetical protein  100 
 
 		 223 aa  458  9.999999999999999e-129  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000059812  n/a   
 
 
-
 
NC_011662  Tmz1t_3595  hypothetical protein  50.89 
 
 		 224 aa  219  3.9999999999999997e-56  Thauera sp. MZ1T  Bacteria  unclonable  0.00000000317158  n/a   
 
 
-
 
NC_007404  Tbd_1490  hypothetical protein  44.84 
 
 		 226 aa  199  3.9999999999999996e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000183047  normal  1 
 
 
-
 
NC_009523  RoseRS_0296  hypothetical protein  35.37 
 
 		 226 aa  121  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000854832  normal  0.0172701 
 
 
-
 
NC_009439  Pmen_0565  hypothetical protein  33.94 
 
 		 217 aa  107  2e-22  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000578097  decreased coverage  3.51919e-17 
 
 
-
 
NC_012917  PC1_0863  hypothetical protein  32 
 
 		 218 aa  102  5e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.522508  n/a   
 
 
-
 
NC_010322  PputGB1_5181  hypothetical protein  34.29 
 
 		 179 aa  94  1e-18  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_0160  hypothetical protein  31.3 
 
 		 212 aa  88.2  8e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0163959  decreased coverage  0.000000325774 
 
 
-
 
NC_009719  Plav_2928  hypothetical protein  28.76 
 
 		 214 aa  86.7  3e-16  Parvibaculum lavamentivorans DS-1  Bacteria  unclonable  0.0000000000000293349  hitchhiker  0.000101363 
 
 
-
 
NC_009438  Sputcn32_3528  hypothetical protein  29.52 
 
 		 212 aa  85.9  5e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.410138  n/a   
 
 
-
 
NC_010814  Glov_2199  hypothetical protein  32.61 
 
 		 213 aa  76.3  0.0000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0935  hypothetical protein  30.43 
 
 		 215 aa  75.9  0.0000000000005  Dickeya zeae Ech1591  Bacteria  normal  0.655564  n/a   
 
 
-
 
NC_011666  Msil_3573  hypothetical protein  25.96 
 
 		 217 aa  57.8  0.0000001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009565  TBFG_10058  hypothetical protein  24.54 
 
 		 230 aa  56.6  0.0000003  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.41088e-98  normal  0.757515 
 
 
-
 
NC_010085  Nmar_1158  hypothetical protein  32.22 
 
 		 392 aa  50.1  0.00003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
-
 
NC_012034  Athe_1661  hypothetical protein  32.11 
 
 		 549 aa  47.4  0.0002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00190356  n/a   
 
 
-
 
NC_009767  Rcas_0073  hypothetical protein  34.21 
 
 		 393 aa  42  0.007  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.0000146563  unclonable  0.00000000120063 
 
 
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