16 homologs were found in PanDaTox collection
for query gene Rpal_1274 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1274  hypothetical protein  100 
 
 
163 aa  317  3e-86  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.915466  n/a   
 
 
-
 
NC_007958  RPD_2730  putative minor curlin subunit precursor (fimbrin sef17 minor subunit)  43.83 
 
 
169 aa  97.1  8e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5119  normal 
 
 
-
 
NC_007511  Bcep18194_B2589  hypothetical protein  32.31 
 
 
180 aa  49.3  0.00002  Burkholderia sp. 383  Bacteria  normal  0.226029  normal 
 
 
-
 
NC_011138  MADE_01503  putative secreted major subunit of curlin, may bind calcium  31.03 
 
 
483 aa  48.5  0.00004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3300  curlin-associated protein  36.79 
 
 
451 aa  47  0.0001  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2946  minor curlin subunit CsgB, putative  37.93 
 
 
144 aa  46.2  0.0002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.121135 
 
 
-
 
NC_004347  SO_0865  hypothetical protein  36.45 
 
 
502 aa  45.4  0.0003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3413  curlin-associated protein  36.45 
 
 
502 aa  45.1  0.0005  Shewanella sp. ANA-3  Bacteria  normal  0.602514  normal 
 
 
-
 
NC_008321  Shewmr4_0721  curlin-associated protein  36.45 
 
 
502 aa  44.7  0.0006  Shewanella sp. MR-4  Bacteria  decreased coverage  0.000376706  normal 
 
 
-
 
NC_007954  Sden_3094  curlin associated  34.69 
 
 
142 aa  44.3  0.0007  Shewanella denitrificans OS217  Bacteria  normal  0.884996  n/a   
 
 
-
 
NC_009052  Sbal_3499  curlin-associated protein  36.79 
 
 
496 aa  43.5  0.001  Shewanella baltica OS155  Bacteria  normal  0.95975  n/a   
 
 
-
 
NC_009438  Sputcn32_3136  curlin-associated protein  35.51 
 
 
496 aa  42  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0841  curlin-associated protein  37.93 
 
 
496 aa  42  0.003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0876  curlin-associated protein  37.93 
 
 
496 aa  42  0.003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0864  Curlin associated repeat protein  37.93 
 
 
496 aa  42.4  0.003  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3412  curlin-associated protein  35.63 
 
 
139 aa  40.4  0.01  Shewanella sp. ANA-3  Bacteria  normal  0.179505  normal 
 
 
-
 
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