92 homologs were found in PanDaTox collection
for query gene Rpal_0362 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_0362  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 		 244 aa  489  1e-137  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.34488  n/a   
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  72.54 
 
 		 244 aa  355  2.9999999999999997e-97  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.45404 
 
 
-
 
NC_007958  RPD_0366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  70.66 
 
 		 244 aa  353  1e-96  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.0042233 
 
 
-
 
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  66.26 
 
 		 247 aa  320  1.9999999999999998e-86  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  63.22 
 
 		 247 aa  310  1e-83  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.81 
 
 		 245 aa  307  9e-83  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_009485  BBta_7366  hypothetical protein  59.75 
 
 		 242 aa  288  7e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.708194  normal  1 
 
 
-
 
NC_011894  Mnod_5432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  48.32 
 
 		 260 aa  206  3e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.932188  n/a   
 
 
-
 
NC_009720  Xaut_2844  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.23 
 
 		 238 aa  192  5e-48  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.907911 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  48.48 
 
 		 260 aa  191  1e-47  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.011733 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.41 
 
 		 261 aa  181  7e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal  1 
 
 
-
 
NC_010581  Bind_2742  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.96 
 
 		 260 aa  179  4e-44  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.615645 
 
 
-
 
NC_011757  Mchl_1401  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.14 
 
 		 271 aa  174  9.999999999999999e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.509564  normal  0.321093 
 
 
-
 
NC_010725  Mpop_1180  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.58 
 
 		 270 aa  174  9.999999999999999e-43  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.171584 
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.7 
 
 		 271 aa  174  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_1374  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.44 
 
 		 256 aa  173  2.9999999999999996e-42  Methylocella silvestris BL2  Bacteria  n/a    normal  0.694327 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.02 
 
 		 251 aa  157  1e-37  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.57 
 
 		 247 aa  147  1.0000000000000001e-34  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_009719  Plav_3592  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.77 
 
 		 255 aa  142  3e-33  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.12 
 
 		 245 aa  132  3.9999999999999996e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.44 
 
 		 249 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.8 
 
 		 249 aa  116  3.9999999999999997e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_007643  Rru_A3420  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.18 
 
 		 270 aa  109  4.0000000000000004e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.331043  n/a   
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.99 
 
 		 270 aa  108  1e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.602445 
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.02 
 
 		 276 aa  103  2e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  33.18 
 
 		 243 aa  99.4  5e-20  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  33.04 
 
 		 245 aa  99.4  5e-20  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0309  hypothetical protein  31.06 
 
 		 238 aa  97.1  2e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  31.49 
 
 		 244 aa  94.4  1e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.39 
 
 		 244 aa  93.6  3e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_2212  hypothetical protein  41.89 
 
 		 164 aa  93.2  3e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.71 
 
 		 276 aa  93.2  3e-18  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_011891  A2cp1_0907  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.27 
 
 		 169 aa  92.4  6e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  unclonable  0.000000000620808  n/a   
 
 
-
 
NC_011138  MADE_01539  uncharacterized metal-binding protein  26.84 
 
 		 243 aa  92  7e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.504021  n/a   
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.62 
 
 		 244 aa  92  8e-18  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.11 
 
 		 267 aa  91.3  1e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.26 
 
 		 243 aa  90.9  2e-17  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  31.49 
 
 		 244 aa  90.5  2e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  30.95 
 
 		 268 aa  90.1  3e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  28.45 
 
 		 289 aa  87.8  2e-16  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_008146  Mmcs_5122  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.7 
 
 		 266 aa  86.7  3e-16  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.76 
 
 		 243 aa  86.7  3e-16  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_008705  Mkms_5211  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.7 
 
 		 266 aa  86.7  3e-16  Mycobacterium sp. KMS  Bacteria  normal  0.733021  normal  1 
 
 
-
 
NC_009077  Mjls_5502  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.7 
 
 		 266 aa  85.5  8e-16  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  29.74 
 
 		 243 aa  83.2  0.000000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_011145  AnaeK_0903  pyridoxamine 5'-phosphate oxidase-related FMN-binding  41.98 
 
 		 167 aa  83.6  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00546716  n/a   
 
 
-
 
NC_010508  Bcenmc03_0262  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.62 
 
 		 219 aa  83.2  0.000000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.854509 
 
 
-
 
NC_011677  PHATRDRAFT_4413  predicted protein  27.59 
 
 		 259 aa  82  0.000000000000008  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.748295  n/a   
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.46 
 
 		 165 aa  81.6  0.00000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0680495 
 
 
-
 
NC_008060  Bcen_2826  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.19 
 
 		 219 aa  80.9  0.00000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0280  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.19 
 
 		 219 aa  80.9  0.00000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.450879  n/a   
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.05 
 
 		 171 aa  80.9  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 		 170 aa  80.1  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.27 
 
 		 184 aa  78.2  0.0000000000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_0208  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.97 
 
 		 219 aa  77.8  0.0000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.996634 
 
 
-
 
NC_010681  Bphyt_0397  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.69 
 
 		 220 aa  76.6  0.0000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_0115  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30 
 
 		 221 aa  75.5  0.0000000000007  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010084  Bmul_0188  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.2 
 
 		 254 aa  74.7  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  hitchhiker  0.0000540256 
 
 
-
 
NC_007760  Adeh_0858  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein  40.62 
 
 		 171 aa  73.6  0.000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00651728  n/a   
 
 
-
 
NC_007951  Bxe_A4323  hypothetical protein  37.5 
 
 		 217 aa  73.2  0.000000000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_0194  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.09 
 
 		 248 aa  72.8  0.000000000005  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A3383  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.76 
 
 		 219 aa  72  0.000000000007  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.13 
 
 		 161 aa  71.2  0.00000000001  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.6 
 
 		 171 aa  71.6  0.00000000001  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_008686  Pden_1574  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.13 
 
 		 161 aa  71.2  0.00000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.588617  normal  0.0203021 
 
 
-
 
NC_007651  BTH_I3156  pyridoxamine 5'-phosphate oxidase family protein  33.67 
 
 		 240 aa  70.9  0.00000000002  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.58 
 
 		 171 aa  69.7  0.00000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.53 
 
 		 167 aa  70.1  0.00000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  33.77 
 
 		 194 aa  66.6  0.0000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.02 
 
 		 164 aa  65.5  0.0000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.957515 
 
 
-
 
NC_008785  BMASAVP1_A3405  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 226 aa  65.5  0.0000000007  Burkholderia mallei SAVP1  Bacteria  normal  0.0603808  n/a   
 
 
-
 
NC_006348  BMA2903  hypothetical protein  37.5 
 
 		 226 aa  65.5  0.0000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_2964  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 226 aa  65.5  0.0000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  0.920476  n/a   
 
 
-
 
NC_009076  BURPS1106A_3910  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 226 aa  65.5  0.0000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_3829  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 226 aa  65.5  0.0000000007  Burkholderia pseudomallei 668  Bacteria  normal  0.841691  n/a   
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  37.7 
 
 		 164 aa  65.5  0.0000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_0049  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 288 aa  65.1  0.000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A1637  pyridoxamine 5'-phosphate oxidase family protein  37.5 
 
 		 291 aa  65.1  0.000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.600964  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.96 
 
 		 199 aa  64.3  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_007974  Rmet_5353  hypothetical protein  33.07 
 
 		 217 aa  63.2  0.000000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.513248  normal  1 
 
 
-
 
NC_009365  OSTLU_13022  predicted protein  26.16 
 
 		 276 aa  59.7  0.00000005  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.197262  normal  0.0448827 
 
 
-
 
NC_009371  OSTLU_41998  predicted protein  24.59 
 
 		 314 aa  54.7  0.000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 		 162 aa  53.9  0.000002  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.57 
 
 		 166 aa  52  0.000008  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.57 
 
 		 166 aa  52  0.000008  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_009675  Anae109_0916  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.93 
 
 		 172 aa  50.8  0.00002  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00374077  normal  1 
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  28.67 
 
 		 176 aa  49.7  0.00004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  30.61 
 
 		 176 aa  48.5  0.0001  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_011687  PHATRDRAFT_54952  predicted protein  24.59 
 
 		 415 aa  46.6  0.0003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.417126  n/a   
 
 
-
 
NC_009943  Dole_2144  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.91 
 
 		 147 aa  46.2  0.0004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0330  heme-binding protein HutZ  28.47 
 
 		 176 aa  43.9  0.002  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  30.3 
 
 		 176 aa  43.5  0.003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>