15 homologs were found in PanDaTox collection
for query gene Rpal_0011 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0011  hypothetical protein  100 
 
 
69 aa  139  9.999999999999999e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0894998  n/a   
 
 
-
 
NC_007958  RPD_0739  hypothetical protein  78.46 
 
 
74 aa  103  6e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0008  hypothetical protein  75.38 
 
 
92 aa  95.9  2e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.791262  normal 
 
 
-
 
NC_009485  BBta_2219  hypothetical protein  58.49 
 
 
63 aa  60.5  0.000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0200525 
 
 
-
 
NC_007778  RPB_1035  hypothetical protein  60.71 
 
 
66 aa  59.7  0.00000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1615  hypothetical protein  60.38 
 
 
63 aa  58.2  0.00000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.180845  n/a   
 
 
-
 
NC_007958  RPD_3220  hypothetical protein  58.49 
 
 
63 aa  58.2  0.00000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.318816  normal 
 
 
-
 
NC_007406  Nwi_2991  hypothetical protein  52.46 
 
 
114 aa  55.8  0.0000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.310456  normal 
 
 
-
 
NC_007964  Nham_1089  hypothetical protein  51.85 
 
 
94 aa  54.3  0.0000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0173  hypothetical protein  49.12 
 
 
117 aa  52.4  0.000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_3019  hypothetical protein  54.9 
 
 
64 aa  49.3  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  0.189985  normal  0.0594421 
 
 
-
 
NC_011894  Mnod_5112  hypothetical protein  49.02 
 
 
65 aa  45.1  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2421  hypothetical protein  55.81 
 
 
73 aa  45.1  0.0004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3278  hypothetical protein  51.22 
 
 
67 aa  40.8  0.005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1708  hypothetical protein  41.79 
 
 
70 aa  40.8  0.006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.118644 
 
 
-
 
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