More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3239 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3239  short-chain dehydrogenase/reductase SDR  100 
 
 
258 aa  515  1.0000000000000001e-145  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.703839 
 
 
-
 
NC_009767  Rcas_3727  short-chain dehydrogenase/reductase SDR  87.6 
 
 
258 aa  438  9.999999999999999e-123  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.358068  hitchhiker  0.00171141 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  40.47 
 
 
258 aa  185  7e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  44.49 
 
 
272 aa  178  5.999999999999999e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  44.44 
 
 
272 aa  166  5e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  37.1 
 
 
264 aa  162  5.0000000000000005e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  36.29 
 
 
264 aa  160  2e-38  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  36.29 
 
 
264 aa  160  2e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  40.62 
 
 
264 aa  160  2e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  36.29 
 
 
264 aa  160  2e-38  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  36.29 
 
 
264 aa  159  4e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  36.96 
 
 
262 aa  158  7e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  41.75 
 
 
264 aa  157  1e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  41.15 
 
 
264 aa  158  1e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  36.29 
 
 
264 aa  157  1e-37  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  34.92 
 
 
264 aa  156  3e-37  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  39.58 
 
 
264 aa  155  6e-37  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  39.58 
 
 
264 aa  155  9e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  45.13 
 
 
237 aa  149  6e-35  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  40.84 
 
 
260 aa  147  2.0000000000000003e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  38.27 
 
 
281 aa  143  2e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  33.7 
 
 
339 aa  143  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  35.14 
 
 
261 aa  143  3e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2188  thiamine pyrophosphate protein central region  43.82 
 
 
847 aa  143  3e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.941679 
 
 
-
 
NC_013730  Slin_3927  short-chain dehydrogenase/reductase SDR  37.34 
 
 
272 aa  142  4e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.743458 
 
 
-
 
NC_007802  Jann_1321  short-chain dehydrogenase/reductase SDR  40.59 
 
 
282 aa  142  7e-33  Jannaschia sp. CCS1  Bacteria  normal  0.889604  normal 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  37.98 
 
 
269 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  41.54 
 
 
330 aa  140  9.999999999999999e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  39.5 
 
 
246 aa  139  3e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_008726  Mvan_0982  short chain dehydrogenase  43.39 
 
 
285 aa  139  3.9999999999999997e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0757  Short-chain dehydrogenase of various substrate specificities  34.86 
 
 
282 aa  139  4.999999999999999e-32  Oenococcus oeni PSU-1  Bacteria  normal  0.0227485  n/a   
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  40.15 
 
 
330 aa  139  4.999999999999999e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  38.72 
 
 
249 aa  139  6e-32  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_008009  Acid345_0796  short-chain dehydrogenase/reductase SDR  38.71 
 
 
281 aa  138  7e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.35999 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  39.92 
 
 
332 aa  138  7.999999999999999e-32  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_008255  CHU_3333  short chain dehydrogenase  37.57 
 
 
280 aa  137  1e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3292  short-chain dehydrogenase/reductase SDR  34.5 
 
 
268 aa  136  3.0000000000000003e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.392753  n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  37.39 
 
 
262 aa  136  3.0000000000000003e-31  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  34.55 
 
 
269 aa  135  5e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_010581  Bind_1468  short-chain dehydrogenase/reductase SDR  41.62 
 
 
277 aa  135  6.0000000000000005e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.875416  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  39.84 
 
 
278 aa  135  7.000000000000001e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  36.08 
 
 
262 aa  134  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003296  RS03890  short chain dehydrogenase  39.11 
 
 
276 aa  133  3e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.606349 
 
 
-
 
NC_010725  Mpop_1226  short-chain dehydrogenase/reductase SDR  38.02 
 
 
247 aa  133  3e-30  Methylobacterium populi BJ001  Bacteria  normal  0.340445  normal  0.365193 
 
 
-
 
NC_012880  Dd703_2717  short chain dehydrogenase  43.24 
 
 
276 aa  133  3e-30  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  32.6 
 
 
230 aa  132  5e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  40.39 
 
 
248 aa  132  5e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  36.89 
 
 
252 aa  132  6e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2810  short-chain dehydrogenase/reductase SDR  41.49 
 
 
284 aa  131  9e-30  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.329601  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  34.72 
 
 
267 aa  131  1.0000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  37.69 
 
 
327 aa  131  1.0000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  38.38 
 
 
267 aa  131  1.0000000000000001e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0756  short chain dehydrogenase  42.31 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.624051 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  34.72 
 
 
267 aa  131  1.0000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  34.72 
 
 
267 aa  131  1.0000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0762  short chain dehydrogenase  42.31 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  34.47 
 
 
267 aa  131  1.0000000000000001e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_013743  Htur_0542  short-chain dehydrogenase/reductase SDR  38.22 
 
 
244 aa  131  1.0000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008705  Mkms_0776  short chain dehydrogenase  42.31 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  34.72 
 
 
267 aa  130  2.0000000000000002e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4560  short chain dehydrogenase  41.49 
 
 
280 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0967831  normal 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  36.92 
 
 
299 aa  130  2.0000000000000002e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_013440  Hoch_5059  short-chain dehydrogenase/reductase SDR  42.93 
 
 
266 aa  130  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0037  short chain dehydrogenase  38.83 
 
 
283 aa  130  3e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.40951  normal 
 
 
-
 
NC_009523  RoseRS_1073  thiamine pyrophosphate enzyme, central region  41.57 
 
 
847 aa  129  4.0000000000000003e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2139  short chain dehydrogenase  39.79 
 
 
284 aa  129  5.0000000000000004e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.980351 
 
 
-
 
NC_011369  Rleg2_4296  short chain dehydrogenase  41.45 
 
 
280 aa  129  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  38.74 
 
 
233 aa  128  8.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  39.47 
 
 
285 aa  128  9.000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_011831  Cagg_1302  short-chain dehydrogenase/reductase SDR  38.55 
 
 
258 aa  127  1.0000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.12307  hitchhiker  0.00977234 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  34.3 
 
 
266 aa  128  1.0000000000000001e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  33.84 
 
 
267 aa  127  1.0000000000000001e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2943  short-chain dehydrogenase/reductase SDR  38.17 
 
 
282 aa  127  2.0000000000000002e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.599912  normal 
 
 
-
 
NC_011060  Ppha_1610  short-chain dehydrogenase/reductase SDR  35.59 
 
 
232 aa  127  2.0000000000000002e-28  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0703  Short-chain alcohol dehydrogenase  37.3 
 
 
284 aa  127  2.0000000000000002e-28  Oenococcus oeni PSU-1  Bacteria  normal  0.465762  n/a   
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  35.43 
 
 
280 aa  127  2.0000000000000002e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_009654  Mmwyl1_4482  short-chain dehydrogenase/reductase SDR  38.3 
 
 
244 aa  127  2.0000000000000002e-28  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000000123251 
 
 
-
 
NC_008254  Meso_3901  short-chain dehydrogenase/reductase SDR  39.15 
 
 
280 aa  127  3e-28  Chelativorans sp. BNC1  Bacteria  normal  0.962145  n/a   
 
 
-
 
NC_010505  Mrad2831_5502  short-chain dehydrogenase/reductase SDR  39.36 
 
 
282 aa  126  4.0000000000000003e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  34.7 
 
 
267 aa  126  4.0000000000000003e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  38.74 
 
 
279 aa  125  5e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_013730  Slin_1406  short-chain dehydrogenase/reductase SDR  34.27 
 
 
267 aa  125  5e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.0615665  normal  0.271714 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  34.83 
 
 
267 aa  125  5e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  39.45 
 
 
544 aa  125  6e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35.68 
 
 
238 aa  125  7e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  39.62 
 
 
269 aa  125  8.000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  36.13 
 
 
287 aa  125  9e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  37.5 
 
 
247 aa  125  9e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5220  short-chain dehydrogenase/reductase SDR  38.74 
 
 
279 aa  125  9e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  34.46 
 
 
267 aa  124  1e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_5146  short-chain dehydrogenase/reductase SDR  40.51 
 
 
285 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00800542  normal  0.26199 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  39.76 
 
 
257 aa  124  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_013132  Cpin_2942  short-chain dehydrogenase/reductase SDR  36.22 
 
 
272 aa  125  1e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1025  short chain dehydrogenase  38.5 
 
 
274 aa  124  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.150864  normal  0.667254 
 
 
-
 
NC_011884  Cyan7425_1782  3-ketoacyl-(acyl-carrier-protein) reductase  40.11 
 
 
244 aa  124  1e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.788783  normal 
 
 
-
 
NC_012850  Rleg_0843  short chain dehydrogenase  38.54 
 
 
275 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.767433  normal 
 
 
-
 
NC_009636  Smed_1211  short-chain dehydrogenase/reductase SDR  38.92 
 
 
274 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.12295  normal  0.414584 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  33.07 
 
 
272 aa  124  2e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4702  short-chain dehydrogenase/reductase SDR  34.74 
 
 
272 aa  123  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.315563  normal  0.0714958 
 
 
-
 
NC_007951  Bxe_A2202  short chain dehydrogenase  39.68 
 
 
276 aa  123  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.516821  decreased coverage  0.00204142 
 
 
-
 
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