More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_2347 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_2347  response regulator receiver protein  100 
 
 
202 aa  411  1e-114  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  82.5 
 
 
200 aa  345  2e-94  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  50.26 
 
 
217 aa  193  2e-48  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  51.08 
 
 
204 aa  192  4e-48  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.26536e-05 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  50 
 
 
204 aa  189  3e-47  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  52.2 
 
 
488 aa  171  8e-42  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  56.55 
 
 
566 aa  169  2e-41  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  53.95 
 
 
367 aa  157  1e-37  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  52.35 
 
 
407 aa  157  1e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  40.58 
 
 
227 aa  155  3e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  44.62 
 
 
337 aa  155  4e-37  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011146  Gbem_0799  response regulator receiver protein  39.8 
 
 
225 aa  153  2e-36  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0846  response regulator receiver protein  39.3 
 
 
225 aa  152  4e-36  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  53.59 
 
 
397 aa  151  5e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  57.03 
 
 
541 aa  151  6e-36  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  53.74 
 
 
440 aa  151  7e-36  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  43.39 
 
 
437 aa  151  7e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  58.73 
 
 
541 aa  149  3e-35  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  56.35 
 
 
553 aa  149  4e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  57.38 
 
 
395 aa  147  9e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  54.69 
 
 
437 aa  147  2e-34  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  51.15 
 
 
301 aa  146  2e-34  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  43.86 
 
 
386 aa  145  3e-34  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  52.63 
 
 
440 aa  144  7e-34  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  6.60181e-06  hitchhiker  0.00876613 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  43.86 
 
 
386 aa  143  2e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  45.83 
 
 
383 aa  140  1e-32  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  51.33 
 
 
443 aa  140  2e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_008312  Tery_1074  response regulator receiver sensor signal transduction histidine kinase  40.91 
 
 
433 aa  137  8e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.708962  normal 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  48.03 
 
 
349 aa  137  1e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  50.75 
 
 
441 aa  135  3e-31  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  51.97 
 
 
361 aa  135  3e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  50.36 
 
 
356 aa  135  4e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  53.38 
 
 
452 aa  134  7e-31  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  49.25 
 
 
441 aa  134  8e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  52.67 
 
 
292 aa  134  9e-31  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  52.78 
 
 
395 aa  133  2e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  48.2 
 
 
336 aa  133  2e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  51.33 
 
 
377 aa  133  2e-30  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  47.76 
 
 
361 aa  132  3e-30  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  51.33 
 
 
377 aa  132  4e-30  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  54.62 
 
 
343 aa  131  6e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  4.82447e-06 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
339 aa  131  8e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
339 aa  130  1e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  47.26 
 
 
480 aa  130  1e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.129673 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.87 
 
 
715 aa  130  2e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.87 
 
 
715 aa  130  2e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  45.95 
 
 
593 aa  129  3e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  45.95 
 
 
593 aa  129  3e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  53.91 
 
 
348 aa  129  4e-29  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  51.2 
 
 
222 aa  129  4e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  53.91 
 
 
348 aa  128  5e-29  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  43.1 
 
 
311 aa  127  8e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  48.57 
 
 
377 aa  127  1e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_014248  Aazo_4225  multi-sensor hybrid histidine kinase  42.66 
 
 
1322 aa  127  1e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3071  response regulator receiver protein  53.38 
 
 
390 aa  127  1e-28  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000442652 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  52.71 
 
 
338 aa  126  2e-28  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  52.71 
 
 
338 aa  126  2e-28  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  50.33 
 
 
348 aa  126  2e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  52.71 
 
 
338 aa  126  2e-28  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  52.71 
 
 
338 aa  126  2e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  54.33 
 
 
350 aa  126  2e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
338 aa  127  2e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  46.67 
 
 
365 aa  126  2e-28  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
338 aa  125  3e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
338 aa  125  3e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  53.49 
 
 
338 aa  125  3e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  47.89 
 
 
377 aa  125  5e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  45.19 
 
 
395 aa  125  5e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  45.32 
 
 
349 aa  125  5e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  45.19 
 
 
395 aa  125  5e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  52.94 
 
 
331 aa  125  6e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  51.94 
 
 
340 aa  125  6e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  47.79 
 
 
353 aa  124  7e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_013440  Hoch_2262  response regulator receiver sensor signal transduction histidine kinase  41.78 
 
 
406 aa  124  7e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.146487 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  38.1 
 
 
383 aa  124  8e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  3.0251e-08 
 
 
-
 
NC_004347  SO_0860  response regulator  52.71 
 
 
339 aa  124  9e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  52.34 
 
 
310 aa  124  1e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  40.94 
 
 
333 aa  123  1e-27  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  48.85 
 
 
363 aa  123  1e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  46.15 
 
 
503 aa  124  1e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2528  response regulator receiver protein  52.71 
 
 
378 aa  124  1e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.249668  normal  0.0734484 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  52.94 
 
 
337 aa  123  1e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  42.45 
 
 
374 aa  123  2e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  42.45 
 
 
374 aa  123  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  50.83 
 
 
353 aa  122  3e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  52.67 
 
 
365 aa  122  3e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_007298  Daro_1573  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region  41.71 
 
 
373 aa  122  4e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  51.69 
 
 
309 aa  121  6e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  52.71 
 
 
346 aa  121  7e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  49.21 
 
 
383 aa  121  7e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  49.21 
 
 
383 aa  120  9e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
328 aa  120  1e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  46.72 
 
 
348 aa  120  1e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  38.1 
 
 
391 aa  120  1e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  50 
 
 
352 aa  120  1e-26  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  50.4 
 
 
359 aa  119  2e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  49.62 
 
 
379 aa  119  2e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  39.05 
 
 
384 aa  119  2e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  40 
 
 
328 aa  120  2e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  50.41 
 
 
370 aa  120  2e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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