12 homologs were found in PanDaTox collection
for query gene RoseRS_1578 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_1578  hypothetical protein  100 
 
 
240 aa  474  1e-133  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.000507242  normal 
 
 
-
 
NC_009767  Rcas_2642  hypothetical protein  90.42 
 
 
240 aa  416  9.999999999999999e-116  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0107943  normal 
 
 
-
 
NC_008541  Arth_3257  lipoprotein  37.44 
 
 
235 aa  100  2e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0735939  n/a   
 
 
-
 
NC_013235  Namu_4658  hypothetical protein  37.07 
 
 
269 aa  100  2e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0475  lipoprotein  34.07 
 
 
279 aa  98.6  9e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.786291  normal 
 
 
-
 
NC_011886  Achl_3055  lipoprotein  36.1 
 
 
235 aa  95.9  5e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3473  lipoprotein  33.49 
 
 
273 aa  94.7  1e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0372  lipoprotein  35.58 
 
 
277 aa  85.5  6e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_0220  lipoprotein  39.89 
 
 
277 aa  84.7  0.000000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4205  hypothetical protein  30.24 
 
 
276 aa  75.5  0.0000000000008  Salinispora tropica CNB-440  Bacteria  normal  normal  0.548465 
 
 
-
 
NC_009953  Sare_4635  hypothetical protein  35.71 
 
 
276 aa  75.1  0.0000000000009  Salinispora arenicola CNS-205  Bacteria  normal  0.616859  normal  0.0645369 
 
 
-
 
NC_009664  Krad_3105  hypothetical protein  30.58 
 
 
280 aa  68.9  0.00000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.58027  normal  0.0277441 
 
 
-
 
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