More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_1357 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  100 
 
 
316 aa  629  1e-179  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  92.38 
 
 
316 aa  565  1e-160  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  66.34 
 
 
317 aa  385  1e-106  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  62 
 
 
309 aa  380  1e-104  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  56.91 
 
 
305 aa  347  1e-94  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  50.17 
 
 
321 aa  313  2.9999999999999996e-84  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  52.19 
 
 
314 aa  308  1.0000000000000001e-82  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  48.2 
 
 
313 aa  293  3e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  47.25 
 
 
315 aa  291  8e-78  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  47.4 
 
 
316 aa  287  1e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  52.12 
 
 
306 aa  286  4e-76  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  49.84 
 
 
314 aa  285  5e-76  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  47.12 
 
 
317 aa  279  5e-74  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  45.49 
 
 
292 aa  274  1.0000000000000001e-72  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  46.46 
 
 
317 aa  273  4.0000000000000004e-72  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  47.3 
 
 
321 aa  271  8.000000000000001e-72  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  47.78 
 
 
319 aa  267  2e-70  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  49.28 
 
 
305 aa  266  4e-70  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  46.5 
 
 
324 aa  265  5.999999999999999e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  46.21 
 
 
283 aa  265  5.999999999999999e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  46.25 
 
 
305 aa  265  8.999999999999999e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  45.07 
 
 
296 aa  265  1e-69  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  50.83 
 
 
309 aa  263  4e-69  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  45.1 
 
 
296 aa  262  6e-69  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  49.28 
 
 
285 aa  262  6e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  46.36 
 
 
308 aa  262  6.999999999999999e-69  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  44.56 
 
 
296 aa  261  8e-69  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  44.56 
 
 
296 aa  261  8e-69  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  45.26 
 
 
296 aa  261  1e-68  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  44.56 
 
 
296 aa  260  2e-68  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  44.91 
 
 
296 aa  260  2e-68  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  44.06 
 
 
296 aa  259  3e-68  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  44.38 
 
 
335 aa  259  6e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  47.56 
 
 
318 aa  257  2e-67  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  45.27 
 
 
298 aa  256  3e-67  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  42.81 
 
 
293 aa  256  3e-67  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  42.67 
 
 
314 aa  255  6e-67  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  44.07 
 
 
335 aa  254  1.0000000000000001e-66  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  48.18 
 
 
307 aa  252  5.000000000000001e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  43.09 
 
 
314 aa  252  6e-66  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
305 aa  252  7e-66  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  46.91 
 
 
331 aa  251  8.000000000000001e-66  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  45.51 
 
 
314 aa  251  1e-65  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  45.05 
 
 
322 aa  251  1e-65  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  43.57 
 
 
292 aa  251  1e-65  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  46.21 
 
 
318 aa  249  3e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  45.02 
 
 
323 aa  249  4e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  45.55 
 
 
317 aa  249  5e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  47.72 
 
 
313 aa  248  1e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  48.72 
 
 
320 aa  248  1e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  42.14 
 
 
302 aa  248  1e-64  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  42.09 
 
 
319 aa  247  2e-64  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  43.14 
 
 
321 aa  247  2e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
318 aa  246  4e-64  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  47.57 
 
 
315 aa  246  4e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  41.21 
 
 
319 aa  246  4e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  43.77 
 
 
293 aa  245  4.9999999999999997e-64  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  41.46 
 
 
319 aa  245  8e-64  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  43.06 
 
 
305 aa  243  1.9999999999999999e-63  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  45.97 
 
 
307 aa  243  3.9999999999999997e-63  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  44.41 
 
 
324 aa  239  4e-62  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  43.77 
 
 
300 aa  238  1e-61  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  45.25 
 
 
309 aa  233  2.0000000000000002e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  42.51 
 
 
294 aa  232  8.000000000000001e-60  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
313 aa  231  1e-59  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  45.23 
 
 
299 aa  231  1e-59  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  45.21 
 
 
319 aa  229  3e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  45.99 
 
 
316 aa  228  8e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  44.95 
 
 
318 aa  228  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  42.43 
 
 
317 aa  225  7e-58  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  42.36 
 
 
317 aa  225  9e-58  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
319 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  41.98 
 
 
307 aa  224  2e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  41.98 
 
 
307 aa  224  2e-57  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  42.95 
 
 
321 aa  222  4.9999999999999996e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  40.2 
 
 
306 aa  221  1.9999999999999999e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  41.1 
 
 
320 aa  219  3.9999999999999997e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  44.41 
 
 
309 aa  217  2e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  44.18 
 
 
302 aa  216  2.9999999999999998e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  41.25 
 
 
312 aa  216  4e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  39.23 
 
 
317 aa  216  5e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  43.24 
 
 
320 aa  214  1.9999999999999998e-54  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  35.81 
 
 
315 aa  214  1.9999999999999998e-54  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3393  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
291 aa  211  1e-53  Meiothermus silvanus DSM 9946  Bacteria  normal  0.199241  normal  0.935882 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
320 aa  209  4e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  40.78 
 
 
292 aa  209  7e-53  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
296 aa  208  9e-53  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0184  binding-protein-dependent transport systems inner membrane component  43.77 
 
 
330 aa  207  1e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  40.94 
 
 
318 aa  207  2e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
299 aa  207  3e-52  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
318 aa  206  4e-52  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
308 aa  206  5e-52  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
308 aa  206  5e-52  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
307 aa  206  6e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  40.74 
 
 
300 aa  205  9e-52  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  40.33 
 
 
313 aa  204  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
309 aa  204  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
308 aa  202  4e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  38.19 
 
 
316 aa  202  5e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  40.82 
 
 
318 aa  202  5e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
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