16 homologs were found in PanDaTox collection
for query gene RoseRS_0272 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0272    100 
 
 
360 bp  714    Roseiflexus sp. RS-1  Bacteria  normal  0.176503  unclonable  0.00000792317 
 
 
-
 
NC_013946  Mrub_2453  Site-specific DNA-methyltransferase (adenine-specific)  82.58 
 
 
1617 bp  172  4e-41  Meiothermus ruber DSM 1279  Bacteria  normal  0.53896  normal  0.845275 
 
 
-
 
NC_011831  Cagg_3300  N-6 DNA methylase  80.23 
 
 
1614 bp  145  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000500405 
 
 
-
 
NC_009523  RoseRS_0275  hypothetical protein  91.75 
 
 
282 bp  129  6e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.270958  unclonable  0.00000842033 
 
 
-
 
NC_002977  MCA0834    84 
 
 
1511 bp  89.7  5e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2017  N-6 DNA methylase  82.86 
 
 
1554 bp  87.7  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.54323  normal 
 
 
-
 
NC_008786  Veis_3128  N-6 DNA methylase  83.64 
 
 
1557 bp  75.8  0.000000000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.465456  decreased coverage  0.00982418 
 
 
-
 
NC_008609  Ppro_1858  N-6 DNA methylase  84.62 
 
 
1623 bp  69.9  0.0000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3006  N-6 DNA methylase  87.5 
 
 
1563 bp  56  0.000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.809429  normal 
 
 
-
 
NC_014165  Tbis_2509  site-specific DNA-methyltransferase  96.88 
 
 
1623 bp  56  0.000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.847656  normal  0.642426 
 
 
-
 
NC_011206  Lferr_2418  N-6 DNA methylase  84.29 
 
 
1578 bp  52  0.0001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.572428  normal  0.0719197 
 
 
-
 
NC_011761  AFE_2793  type I restriction-modification system, M subunit  84.29 
 
 
1578 bp  52  0.0001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3915  N-6 DNA methylase  93.94 
 
 
1626 bp  50.1  0.0004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7556  Site-specific DNA-methyltransferase (adenine- specific)  87.76 
 
 
1635 bp  50.1  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_4006  N-6 DNA methylase  93.55 
 
 
1545 bp  46.1  0.007  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0005  type I restriction-modification system, M subunit  93.55 
 
 
1587 bp  46.1  0.007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>