12 homologs were found in PanDaTox collection
for query gene RoseRS_0258 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_0258  XRE family transcriptional regulator  100 
 
 		 109 aa  225  1e-58  Roseiflexus sp. RS-1  Bacteria  unclonable  0.00000000138252  normal  0.0122449 
 
 
-
 
NC_009767  Rcas_0278  XRE family transcriptional regulator  81.37 
 
 		 110 aa  171  2.9999999999999996e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.111983  normal  1 
 
 
-
 
NC_009939  Dgeo_3108  N-6 DNA methylase  40 
 
 		 610 aa  48.5  0.00003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011060  Ppha_0164  transcriptional regulator, XRE family  43.1 
 
 		 107 aa  47.4  0.00007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.862423  n/a   
 
 
-
 
NC_010571  Oter_0530  XRE family transcriptional regulator  40 
 
 		 181 aa  44.7  0.0004  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1818  XRE family transcriptional regulator  39.66 
 
 		 107 aa  42  0.002  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000000178339  normal  1 
 
 
-
 
NC_013204  Elen_1286  transcriptional regulator, XRE family  47.17 
 
 		 197 aa  42  0.003  Eggerthella lenta DSM 2243  Bacteria  normal  0.0709374  normal  1 
 
 
-
 
NC_011830  Dhaf_0656  transcriptional regulator, XRE family  53.49 
 
 		 71 aa  41.2  0.004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1789  transcriptional regulator, XRE family  41.67 
 
 		 198 aa  41.6  0.004  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000770501  n/a   
 
 
-
 
NC_007514  Cag_1811  XRE family transcriptional regulator  39.29 
 
 		 108 aa  40.8  0.007  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_0324  hypothetical protein  36.07 
 
 		 99 aa  40.4  0.008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.929331 
 
 
-
 
NC_011060  Ppha_1845  transcriptional regulator, XRE family  36 
 
 		 105 aa  40  0.009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
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