149 homologs were found in PanDaTox collection
for query gene RoseRS_0030 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
144 aa  293  4e-79  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  95.14 
 
 
144 aa  284  2.9999999999999996e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  65.49 
 
 
142 aa  190  6e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  58.39 
 
 
139 aa  155  2e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.19 
 
 
147 aa  84.7  4e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_009767  Rcas_4099  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.71 
 
 
147 aa  84.3  5e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256347  normal  0.1124 
 
 
-
 
NC_009972  Haur_1623  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.82 
 
 
154 aa  78.6  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  29.58 
 
 
160 aa  78.2  0.00000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  29.58 
 
 
160 aa  78.6  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  29.58 
 
 
160 aa  78.6  0.00000000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.29 
 
 
154 aa  74.3  0.0000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.9  0.0000000000006  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  28.87 
 
 
160 aa  73.9  0.0000000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.6  0.0000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.6  0.0000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.6  0.0000000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.6  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  28.17 
 
 
160 aa  73.2  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
160 aa  72.8  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.54 
 
 
154 aa  72  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.35 
 
 
155 aa  72.4  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  33.58 
 
 
162 aa  71.6  0.000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  40.2 
 
 
149 aa  65.5  0.0000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2974  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.08 
 
 
151 aa  64.7  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  33.05 
 
 
145 aa  64.3  0.0000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2285  anti-sigma F factor  35.25 
 
 
141 aa  62.8  0.000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  27.74 
 
 
159 aa  61.2  0.000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  27.01 
 
 
159 aa  61.2  0.000000005  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  27.01 
 
 
159 aa  61.2  0.000000005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.86 
 
 
147 aa  60.1  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  39.42 
 
 
142 aa  59.7  0.00000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.5 
 
 
151 aa  60.1  0.00000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
158 aa  58.9  0.00000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2515  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.4 
 
 
148 aa  57.8  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.538602  normal  0.204677 
 
 
-
 
NC_010424  Daud_1225  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
148 aa  57.8  0.00000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00856956  n/a   
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.91 
 
 
286 aa  57.4  0.00000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  33.93 
 
 
146 aa  57.4  0.00000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_009253  Dred_1104  anti-sigma F factor  31.54 
 
 
148 aa  57  0.00000009  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.41 
 
 
134 aa  57  0.00000009  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  31.78 
 
 
153 aa  55.5  0.0000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  31.86 
 
 
141 aa  55.1  0.0000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3035  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.24 
 
 
142 aa  55.5  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.0000026791 
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
141 aa  54.7  0.0000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
141 aa  54.7  0.0000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4423  multi-sensor signal transduction histidine kinase  31.37 
 
 
1361 aa  53.5  0.0000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.498632 
 
 
-
 
NC_007333  Tfu_1805  hypothetical protein  36.15 
 
 
145 aa  53.1  0.000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.48 
 
 
143 aa  53.1  0.000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.47 
 
 
147 aa  53.1  0.000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  27.56 
 
 
148 aa  52.8  0.000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2772  anti-sigma F factor  30.63 
 
 
146 aa  52  0.000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0313076  n/a   
 
 
-
 
NC_013093  Amir_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.82 
 
 
339 aa  52.4  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1931  multi-sensor signal transduction histidine kinase  33.33 
 
 
1385 aa  52  0.000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.25 
 
 
147 aa  52  0.000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_013203  Apar_0915  anti-sigma-factor antagonist  30.58 
 
 
243 aa  51.2  0.000005  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.583996 
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.04 
 
 
139 aa  50.8  0.000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.06 
 
 
140 aa  51.2  0.000005  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
NC_010001  Cphy_0477  anti-sigma F factor  31.97 
 
 
157 aa  51.2  0.000005  Clostridium phytofermentans ISDg  Bacteria  normal  0.899963  n/a   
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  30.21 
 
 
142 aa  50.8  0.000006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0611  putative anti-sigma regulatory factor (serine/threonine protein kinase)  31.97 
 
 
136 aa  50.8  0.000006  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.0000000221562  n/a   
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  29.23 
 
 
143 aa  50.8  0.000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_013739  Cwoe_4484  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.5 
 
 
138 aa  50.8  0.000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.292037 
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  31.36 
 
 
143 aa  50.4  0.000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.25 
 
 
141 aa  50.4  0.000008  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_007777  Francci3_4415  putative serine/threonine kinase anti-sigma factor  28.24 
 
 
175 aa  50.1  0.00001  Frankia sp. CcI3  Bacteria  decreased coverage  0.00721125  normal 
 
 
-
 
NC_013595  Sros_8976  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.78 
 
 
146 aa  48.9  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0066  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.79 
 
 
132 aa  48.9  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  28.68 
 
 
133 aa  48.5  0.00003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_008262  CPR_2021  anti-sigma F factor  28.93 
 
 
140 aa  48.1  0.00003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34940  fused histidine kinase with GAF domain/SpoIIE-like protein  33.96 
 
 
537 aa  48.5  0.00003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.24735  normal  0.897834 
 
 
-
 
NC_011725  BCB4264_A4183  anti-sigma F factor  30.97 
 
 
146 aa  48.5  0.00003  Bacillus cereus B4264  Bacteria  normal  0.0790038  n/a   
 
 
-
 
NC_011772  BCG9842_B1055  anti-sigma F factor  30.97 
 
 
146 aa  48.5  0.00003  Bacillus cereus G9842  Bacteria  normal  normal  0.0411626 
 
 
-
 
NC_003909  BCE_4143  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00316995  n/a   
 
 
-
 
NC_005945  BAS3984  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus anthracis str. Sterne  Bacteria  normal  0.132565  n/a   
 
 
-
 
NC_005957  BT9727_3814  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3830  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus cereus E33L  Bacteria  normal  0.0386677  n/a   
 
 
-
 
NC_007516  Syncc9605_1200  putative anti-sigma regulatory factor (serine/threonine protein kinase)  33.63 
 
 
145 aa  48.1  0.00004  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4295  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.65439  n/a   
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  32.32 
 
 
148 aa  48.1  0.00004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2306  anti-sigma F factor  28.93 
 
 
140 aa  48.1  0.00004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4095  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.69426e-22 
 
 
-
 
NC_010184  BcerKBAB4_3904  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4206  anti-sigma F factor  30.97 
 
 
146 aa  48.1  0.00004  Bacillus cereus AH187  Bacteria  unclonable  0.00000000134887  n/a   
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.31 
 
 
155 aa  47.8  0.00005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_013595  Sros_0495  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.27 
 
 
148 aa  47.8  0.00005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5207  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.23 
 
 
323 aa  47  0.00008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.441203 
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  26.27 
 
 
149 aa  47  0.0001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.26 
 
 
151 aa  46.6  0.0001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_013158  Huta_2850  histidine kinase  34.23 
 
 
343 aa  46.6  0.0001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0497366  n/a   
 
 
-
 
NC_009380  Strop_3724  ATPase domain-containing protein  30 
 
 
163 aa  47  0.0001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05599  response regulator receiver  31.16 
 
 
560 aa  46.6  0.0001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.63 
 
 
143 aa  46.2  0.0001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27.12 
 
 
144 aa  45.8  0.0002  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_008146  Mmcs_0350  PAS/PAC sensor hybrid histidine kinase  29.81 
 
 
1390 aa  45.4  0.0002  Mycobacterium sp. MCS  Bacteria  normal  0.0937102  n/a   
 
 
-
 
NC_008705  Mkms_0360  PAS/PAC sensor hybrid histidine kinase  29.81 
 
 
1390 aa  45.4  0.0002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.592677 
 
 
-
 
NC_007335  PMN2A_0138  anti-sigma regulatory factor (Ser/Thr protein kinase)  30.84 
 
 
130 aa  45.1  0.0003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.52 
 
 
146 aa  45.1  0.0003  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_008726  Mvan_3797  putative GAF sensor protein  33.33 
 
 
828 aa  45.1  0.0003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.818563 
 
 
-
 
NC_008819  NATL1_07701  anti-sigma regulatory factor (Ser/Thr protein kinase)  32.04 
 
 
130 aa  45.4  0.0003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.0584131 
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  26.83 
 
 
146 aa  45.4  0.0003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3338  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.45 
 
 
138 aa  45.1  0.0003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
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