More than 300 homologs were found in PanDaTox collection
for query gene Rmet_3723 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_3723  HAMP domain-containing protein  100 
 
 
628 aa  1261    Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  52 
 
 
634 aa  588  1e-167  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
620 aa  496  1e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
620 aa  495  9.999999999999999e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
620 aa  495  9.999999999999999e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
620 aa  489  1e-137  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
620 aa  487  1e-136  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
620 aa  478  1e-133  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_007511  Bcep18194_B2357  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
620 aa  469  1.0000000000000001e-131  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  30.91 
 
 
641 aa  309  9e-83  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
640 aa  304  3.0000000000000004e-81  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
661 aa  298  3e-79  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
632 aa  297  3e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  31.11 
 
 
640 aa  294  4e-78  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  51.95 
 
 
630 aa  288  2.9999999999999996e-76  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  51.62 
 
 
628 aa  286  5.999999999999999e-76  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
611 aa  286  8e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  47.01 
 
 
653 aa  284  3.0000000000000004e-75  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  51.27 
 
 
543 aa  283  5.000000000000001e-75  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.62 
 
 
596 aa  283  8.000000000000001e-75  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
554 aa  282  1e-74  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  51.27 
 
 
652 aa  282  1e-74  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.99 
 
 
600 aa  282  2e-74  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  53.16 
 
 
553 aa  281  2e-74  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  52.35 
 
 
553 aa  281  3e-74  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  52.35 
 
 
553 aa  281  3e-74  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  52.85 
 
 
553 aa  280  5e-74  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
553 aa  280  5e-74  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
554 aa  280  5e-74  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.45 
 
 
599 aa  280  6e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  52.9 
 
 
555 aa  280  6e-74  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
554 aa  279  8e-74  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
566 aa  278  2e-73  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  38.82 
 
 
646 aa  278  3e-73  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.79 
 
 
600 aa  278  3e-73  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
569 aa  276  1.0000000000000001e-72  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
555 aa  275  1.0000000000000001e-72  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  43.81 
 
 
599 aa  275  2.0000000000000002e-72  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
599 aa  274  3e-72  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
628 aa  275  3e-72  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  53.51 
 
 
599 aa  274  4.0000000000000004e-72  Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  50.79 
 
 
567 aa  273  5.000000000000001e-72  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2100  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
512 aa  273  5.000000000000001e-72  Enterobacter sp. 638  Bacteria  normal  0.0381834  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  50.47 
 
 
649 aa  273  5.000000000000001e-72  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  50.47 
 
 
649 aa  273  5.000000000000001e-72  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  52.65 
 
 
557 aa  273  6e-72  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  52.65 
 
 
557 aa  273  6e-72  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
599 aa  273  6e-72  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
599 aa  273  6e-72  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  51.42 
 
 
575 aa  273  6e-72  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
653 aa  273  8.000000000000001e-72  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  52.65 
 
 
557 aa  273  8.000000000000001e-72  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
555 aa  273  1e-71  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  49.37 
 
 
562 aa  272  1e-71  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  50 
 
 
524 aa  272  2e-71  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.32 
 
 
599 aa  272  2e-71  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
649 aa  271  2e-71  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
602 aa  272  2e-71  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  40.72 
 
 
601 aa  271  2.9999999999999997e-71  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  45.23 
 
 
668 aa  271  2.9999999999999997e-71  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
610 aa  271  2.9999999999999997e-71  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  48.48 
 
 
549 aa  271  2.9999999999999997e-71  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  52.85 
 
 
551 aa  271  4e-71  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  52.85 
 
 
551 aa  270  4e-71  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  52.85 
 
 
551 aa  271  4e-71  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
586 aa  270  4e-71  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.05 
 
 
599 aa  270  5e-71  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
554 aa  270  5.9999999999999995e-71  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
519 aa  270  5.9999999999999995e-71  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  53.35 
 
 
557 aa  270  7e-71  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  53.35 
 
 
554 aa  270  7e-71  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  53.35 
 
 
554 aa  270  7e-71  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.47 
 
 
583 aa  270  8e-71  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  53.35 
 
 
554 aa  269  8.999999999999999e-71  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  51.14 
 
 
541 aa  269  1e-70  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  31.42 
 
 
645 aa  269  1e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.48 
 
 
584 aa  269  1e-70  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
519 aa  269  1e-70  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.34 
 
 
596 aa  268  2e-70  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  50.45 
 
 
572 aa  268  2e-70  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
578 aa  268  2e-70  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
516 aa  268  2e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  50.46 
 
 
527 aa  268  2e-70  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  49.38 
 
 
542 aa  267  2.9999999999999995e-70  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
651 aa  268  2.9999999999999995e-70  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  52.53 
 
 
551 aa  267  4e-70  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
584 aa  267  4e-70  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  48.43 
 
 
552 aa  267  5e-70  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  41.08 
 
 
601 aa  267  5e-70  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
653 aa  267  5e-70  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  50.49 
 
 
598 aa  267  5e-70  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  48.02 
 
 
667 aa  266  5.999999999999999e-70  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
653 aa  266  5.999999999999999e-70  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  41.87 
 
 
605 aa  266  7e-70  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
596 aa  266  7e-70  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
630 aa  266  8e-70  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  48.77 
 
 
565 aa  266  8.999999999999999e-70  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  50.65 
 
 
649 aa  266  8.999999999999999e-70  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.25 
 
 
610 aa  266  8.999999999999999e-70  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  44.07 
 
 
580 aa  266  8.999999999999999e-70  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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