More than 300 homologs were found in PanDaTox collection
for query gene Rmet_0110 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_0110  HAD family hydrolase  100 
 
 
227 aa  462  1e-129  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0142  HAD family hydrolase  70.76 
 
 
235 aa  328  5.0000000000000004e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0271  hypothetical protein  61.47 
 
 
229 aa  261  4e-69  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  57.78 
 
 
229 aa  251  8.000000000000001e-66  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  57.59 
 
 
232 aa  248  5e-65  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3047  HAD-superfamily hydrolase, subfamily IA, variant 3  48.88 
 
 
226 aa  193  1e-48  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0085  HAD family hydrolase  48.87 
 
 
228 aa  192  3e-48  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4727  HAD-superfamily hydrolase, subfamily IA, variant 3  51.57 
 
 
230 aa  188  7e-47  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5978  HAD family hydrolase  46.19 
 
 
230 aa  181  9.000000000000001e-45  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.367832 
 
 
-
 
NC_008782  Ajs_0330  HAD family hydrolase  47.53 
 
 
225 aa  180  1e-44  Acidovorax sp. JS42  Bacteria  normal  normal  0.438813 
 
 
-
 
NC_007952  Bxe_B1631  HAD family hydrolase  50.22 
 
 
230 aa  174  9.999999999999999e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.318646  normal  0.223643 
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  47.69 
 
 
214 aa  171  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0045  putative haloacid dehalogenase-like hydrolase  42.15 
 
 
232 aa  169  3e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.617373 
 
 
-
 
NC_007413  Ava_0109  HAD family hydrolase  41.41 
 
 
223 aa  167  1e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  decreased coverage  0.00453013 
 
 
-
 
NC_010625  Bphy_5788  HAD family hydrolase  46.85 
 
 
227 aa  167  1e-40  Burkholderia phymatum STM815  Bacteria  normal  normal  0.438539 
 
 
-
 
NC_008781  Pnap_0467  HAD family hydrolase  45.45 
 
 
219 aa  164  9e-40  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.530029  normal 
 
 
-
 
NC_010676  Bphyt_5016  HAD-superfamily hydrolase, subfamily IA, variant 3  50.45 
 
 
230 aa  164  1.0000000000000001e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0704684  normal  0.049198 
 
 
-
 
NC_007925  RPC_0467  HAD family hydrolase  43.89 
 
 
219 aa  159  4e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.577769 
 
 
-
 
NC_011071  Smal_2077  HAD-superfamily hydrolase, subfamily IA, variant 3  47.3 
 
 
231 aa  158  7e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0155497  normal 
 
 
-
 
NC_009654  Mmwyl1_2542  HAD family hydrolase  39.91 
 
 
214 aa  152  2.9999999999999998e-36  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.214098 
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  43.05 
 
 
217 aa  152  2.9999999999999998e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3773  HAD family hydrolase  43.95 
 
 
220 aa  150  1e-35  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  42.99 
 
 
217 aa  150  2e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1543  HAD family hydrolase  41.47 
 
 
218 aa  150  2e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.290377 
 
 
-
 
NC_013947  Snas_5789  HAD-superfamily hydrolase subfamily IA, variant 3  39.53 
 
 
248 aa  145  4.0000000000000006e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.805096 
 
 
-
 
NC_002977  MCA0959  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  38.53 
 
 
216 aa  144  8.000000000000001e-34  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0734377  n/a   
 
 
-
 
NC_007802  Jann_0442  HAD family hydrolase  39.37 
 
 
218 aa  143  2e-33  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3250  HAD-superfamily hydrolase, subfamily IA, variant 3  42.13 
 
 
223 aa  141  6e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_008060  Bcen_2076  HAD family hydrolase  39.19 
 
 
244 aa  141  9e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_008542  Bcen2424_2687  HAD family hydrolase  39.19 
 
 
244 aa  141  9e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2716  HAD family hydrolase  39.19 
 
 
228 aa  140  9.999999999999999e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2561  HAD family hydrolase  43.12 
 
 
214 aa  139  1.9999999999999998e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.467395  normal  0.978444 
 
 
-
 
NC_007510  Bcep18194_A6015  HAD family hydrolase  39.19 
 
 
228 aa  140  1.9999999999999998e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  40.74 
 
 
222 aa  140  1.9999999999999998e-32  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_010084  Bmul_0610  HAD family hydrolase  38.74 
 
 
260 aa  139  3.9999999999999997e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  40.45 
 
 
230 aa  139  3.9999999999999997e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_008752  Aave_4360  HAD family hydrolase  50.89 
 
 
241 aa  139  3.9999999999999997e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0902  hydrolase, haloacid dehalogenase-like hydrolase  43.12 
 
 
214 aa  139  4.999999999999999e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5021  HAD-superfamily hydrolase, subfamily IA, variant 3  36.49 
 
 
223 aa  137  2e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.886555  normal  0.11436 
 
 
-
 
NC_008390  Bamb_2741  HAD family hydrolase  37.84 
 
 
240 aa  135  4e-31  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2605  HAD family hydrolase  37.84 
 
 
240 aa  135  4e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0896  HAD-superfamily hydrolase  38.74 
 
 
228 aa  134  8e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0996  HAD family hydrolase  38.29 
 
 
219 aa  134  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0106068 
 
 
-
 
NC_010505  Mrad2831_4509  HAD family hydrolase  37.89 
 
 
225 aa  134  9.999999999999999e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0716  haloacid dehalogenase, IA family protein  38.29 
 
 
228 aa  133  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.93684  n/a   
 
 
-
 
NC_006348  BMA0231  HAD-superfamily hydrolase  38.29 
 
 
228 aa  132  3e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4184  HAD family hydrolase  33.95 
 
 
212 aa  133  3e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2473  HAD family hydrolase  36.65 
 
 
230 aa  132  3e-30  Acidiphilium cryptum JF-5  Bacteria  normal  0.0237734  n/a   
 
 
-
 
NC_009080  BMA10247_2443  HAD-superfamily hydrolase  38.29 
 
 
228 aa  132  3e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  0.151709  n/a   
 
 
-
 
NC_009076  BURPS1106A_0730  haloacid dehalogenase, IA family protein  38.29 
 
 
228 aa  132  3e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2715  HAD-superfamily hydrolase  38.29 
 
 
228 aa  132  3e-30  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2363  HAD-superfamily hydrolase  38.29 
 
 
228 aa  132  3e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  0.340076  n/a   
 
 
-
 
NC_010622  Bphy_0418  HAD family hydrolase  37.1 
 
 
228 aa  130  2.0000000000000002e-29  Burkholderia phymatum STM815  Bacteria  normal  normal  0.513093 
 
 
-
 
NC_011004  Rpal_0453  HAD-superfamily hydrolase, subfamily IA, variant 3  39.27 
 
 
219 aa  129  3e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0596  HAD-superfamily hydrolase  37.39 
 
 
240 aa  129  3e-29  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_3004  HAD family hydrolase  45.41 
 
 
214 aa  129  3e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.293742 
 
 
-
 
NC_007951  Bxe_A0636  HAD family hydrolase  38.01 
 
 
252 aa  129  4.0000000000000003e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0665  haloacid dehalogenase, IA family protein  38.81 
 
 
231 aa  128  9.000000000000001e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.233376  n/a   
 
 
-
 
NC_010511  M446_2179  HAD family hydrolase  40.26 
 
 
223 aa  127  1.0000000000000001e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_010681  Bphyt_3323  HAD-superfamily hydrolase, subfamily IA, variant 3  38.01 
 
 
228 aa  127  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.866957  normal  0.157588 
 
 
-
 
NC_012560  Avin_11460  HAD-superfamily hydrolase, subfamily IA, variant 3  39.65 
 
 
233 aa  126  2.0000000000000002e-28  Azotobacter vinelandii DJ  Bacteria  normal  0.0237278  n/a   
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  36.82 
 
 
242 aa  126  2.0000000000000002e-28  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  34.68 
 
 
230 aa  127  2.0000000000000002e-28  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
NC_008463  PA14_07310  putative hydrolase  38.36 
 
 
224 aa  126  3e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.642028  normal  0.985429 
 
 
-
 
NC_009504  BOV_A0909  HAD superfamily hydrolase  35.56 
 
 
223 aa  125  4.0000000000000003e-28  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1142  HAD-superfamily hydrolase, subfamily IA, variant 3  38.79 
 
 
231 aa  125  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.513371  n/a   
 
 
-
 
NC_009667  Oant_0603  HAD family hydrolase  38.01 
 
 
230 aa  125  6e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.432882  n/a   
 
 
-
 
NC_007651  BTH_I0698  HAD-superfamily hydrolase  40.09 
 
 
232 aa  124  9e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0336  HAD-superfamily hydrolase  40.09 
 
 
232 aa  124  1e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  0.438572  n/a   
 
 
-
 
NC_009080  BMA10247_0082  HAD family hydrolase  40.09 
 
 
232 aa  124  1e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0196618  n/a   
 
 
-
 
NC_012848  Rleg_4948  HAD-superfamily hydrolase, subfamily IA, variant 3  37.44 
 
 
223 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0634  HAD-superfamily hydrolase  40.09 
 
 
232 aa  124  1e-27  Burkholderia mallei SAVP1  Bacteria  normal  0.535941  n/a   
 
 
-
 
NC_008836  BMA10229_A2468  HAD-superfamily hydrolase  40.09 
 
 
232 aa  124  1e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  0.273983  n/a   
 
 
-
 
NC_004311  BRA0969  HAD superfamily hydrolase  35.56 
 
 
223 aa  123  2e-27  Brucella suis 1330  Bacteria  normal  0.512298  n/a   
 
 
-
 
NC_012850  Rleg_3747  HAD-superfamily hydrolase, subfamily IA, variant 3  39.9 
 
 
229 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.422409  normal 
 
 
-
 
NC_008781  Pnap_2743  HAD family hydrolase  36.04 
 
 
227 aa  123  2e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.994994  normal  0.0511558 
 
 
-
 
NC_007434  BURPS1710b_1038  HAD-superfamily hydrolase  40.09 
 
 
232 aa  123  3e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0879  HAD family hydrolase  40.09 
 
 
232 aa  123  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3367  isochorismate synthase  36.28 
 
 
208 aa  122  4e-27  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0514575 
 
 
-
 
NC_007963  Csal_0637  HAD family hydrolase  37.39 
 
 
230 aa  120  9.999999999999999e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.808868  n/a   
 
 
-
 
NC_010725  Mpop_3493  HAD-superfamily hydrolase, subfamily IA, variant 3  35.65 
 
 
228 aa  120  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  normal  0.292984 
 
 
-
 
NC_010717  PXO_02024  hydrolase  42.25 
 
 
206 aa  119  3e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.247086  n/a   
 
 
-
 
NC_011369  Rleg2_3445  HAD-superfamily hydrolase, subfamily IA, variant 3  38.86 
 
 
229 aa  119  3.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0489  HAD superfamily hydrolase  37.56 
 
 
228 aa  119  4.9999999999999996e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0493  phosphoglycolate phosphatase  37.56 
 
 
228 aa  119  4.9999999999999996e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1388  HAD family hydrolase  34.88 
 
 
223 aa  119  4.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_4007  6-phosphogluconate phosphatase  34.7 
 
 
222 aa  118  6e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3573  hypothetical protein  35.42 
 
 
224 aa  119  6e-26  Agrobacterium vitis S4  Bacteria  normal  0.141866  n/a   
 
 
-
 
NC_012850  Rleg_0694  HAD-superfamily hydrolase, subfamily IA, variant 3  35.4 
 
 
229 aa  118  7.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1080  hypothetical protein  33.63 
 
 
229 aa  118  7.999999999999999e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0637  HAD-superfamily hydrolase, subfamily IA, variant 3  34.38 
 
 
229 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  0.213307 
 
 
-
 
NC_010681  Bphyt_3243  HAD-superfamily hydrolase, subfamily IA, variant 3  38.64 
 
 
237 aa  116  1.9999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0124526  normal  0.9958 
 
 
-
 
NC_007951  Bxe_A0723  HAD family hydrolase  40.09 
 
 
240 aa  116  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.272248  normal 
 
 
-
 
NC_011149  SeAg_B4077  6-phosphogluconate phosphatase  34.72 
 
 
221 aa  116  3e-25  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4120  HAD family hydrolase  35.71 
 
 
237 aa  115  5e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1190  hypothetical protein  40.1 
 
 
204 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.995327  normal 
 
 
-
 
NC_008025  Dgeo_1330  HAD family hydrolase  36.96 
 
 
230 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4216  6-phosphogluconate phosphatase  32.88 
 
 
223 aa  114  2.0000000000000002e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2640  HAD family hydrolase  36.6 
 
 
237 aa  112  4.0000000000000004e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.576989  n/a   
 
 
-
 
NC_009049  Rsph17029_1725  HAD family hydrolase  38.22 
 
 
228 aa  112  5e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
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