10 homologs were found in PanDaTox collection
for query gene Rmar_1633 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013501  Rmar_1633  CRISPR-associated RAMP protein, Csm5 family  100 
 
 
485 aa  994  Rhodothermus marinus DSM 4252  Bacteria  decreased coverage  1.63126e-05  n/a   
 
 
-
 
NC_012034  Athe_2700  CRISPR-associated RAMP protein, Csm5 family  22.89 
 
 
390 aa  85.1  3e-15  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2479  CRISPR-associated RAMP Csm5 family protein  25.69 
 
 
362 aa  77.4  5e-13  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3447  CRISPR-associated RAMP protein, Csm5 family  27.27 
 
 
471 aa  74.3  5e-12  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.186008 
 
 
-
 
NC_009635  Maeo_1079  CRISPR-associated RAMP Csm5 family protein  25.33 
 
 
385 aa  53.5  7e-06  Methanococcus aeolicus Nankai-3  Archaea  normal  0.485474  n/a   
 
 
-
 
NC_008346  Swol_1752  hypothetical protein  25.74 
 
 
380 aa  53.5  9e-06  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0977  hypothetical protein  28.46 
 
 
357 aa  50.1  0.0001  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1981  CRISPR-associated RAMP Csm5 family protein  24 
 
 
476 aa  46.2  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.244308 
 
 
-
 
NC_002976  SERP2457  CRISPR-associated Csm5 family protein  24.82 
 
 
340 aa  44.3  0.005  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0486574  n/a   
 
 
-
 
NC_014212  Mesil_0703  CRISPR-associated RAMP protein, Csm5 family  25.35 
 
 
376 aa  43.9  0.007  Meiothermus silvanus DSM 9946  Bacteria  normal  0.932167  hitchhiker  0.00582507 
 
 
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