More than 300 homologs were found in PanDaTox collection
for query gene Rmar_1123 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  100 
 
 		 242 aa  487  1e-137  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  70.7 
 
 		 234 aa  303  2.0000000000000002e-81  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  41.85 
 
 		 234 aa  196  3e-49  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.14113 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  46.63 
 
 		 217 aa  189  2.9999999999999997e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  40.87 
 
 		 274 aa  168  7e-41  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  40.48 
 
 		 223 aa  166  4e-40  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  41.35 
 
 		 229 aa  164  1.0000000000000001e-39  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  36.53 
 
 		 224 aa  161  1e-38  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_010571  Oter_4250  two component LuxR family transcriptional regulator  40.28 
 
 		 246 aa  153  2e-36  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.59923 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  35.58 
 
 		 215 aa  147  1.0000000000000001e-34  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  37.14 
 
 		 217 aa  147  2.0000000000000003e-34  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  38.94 
 
 		 214 aa  147  2.0000000000000003e-34  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  33.64 
 
 		 222 aa  146  3e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.43 
 
 		 221 aa  145  4.0000000000000006e-34  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  33.18 
 
 		 215 aa  144  2e-33  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  35.81 
 
 		 233 aa  143  3e-33  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  36.41 
 
 		 213 aa  142  4e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.93 
 
 		 216 aa  142  5e-33  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  35.75 
 
 		 233 aa  141  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  37.98 
 
 		 220 aa  140  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  34.51 
 
 		 217 aa  139  3e-32  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  33.18 
 
 		 230 aa  139  3e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  37.98 
 
 		 215 aa  139  4.999999999999999e-32  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  33.97 
 
 		 212 aa  138  6e-32  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  33.18 
 
 		 230 aa  138  7.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  38.46 
 
 		 214 aa  138  7.999999999999999e-32  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  35.12 
 
 		 220 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  38.38 
 
 		 244 aa  135  4e-31  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  36.82 
 
 		 222 aa  135  5e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  38.38 
 
 		 216 aa  135  5e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.3 
 
 		 215 aa  135  8e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.17 
 
 		 214 aa  135  8e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  32.23 
 
 		 226 aa  135  9e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  33.65 
 
 		 210 aa  133  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.29 
 
 		 215 aa  133  1.9999999999999998e-30  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  32.85 
 
 		 213 aa  133  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  34.3 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  34.3 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  36.02 
 
 		 215 aa  132  3.9999999999999996e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  132  6e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  132  6e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  132  6e-30  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  132  6e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  132  6e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  32.43 
 
 		 235 aa  132  6.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.81 
 
 		 214 aa  132  6.999999999999999e-30  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  33.96 
 
 		 232 aa  132  6.999999999999999e-30  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  36.54 
 
 		 210 aa  132  6.999999999999999e-30  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  35.58 
 
 		 209 aa  131  7.999999999999999e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  36.06 
 
 		 213 aa  131  7.999999999999999e-30  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  32.72 
 
 		 228 aa  131  9e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  36.54 
 
 		 210 aa  131  1.0000000000000001e-29  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  34.55 
 
 		 215 aa  131  1.0000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  34.6 
 
 		 215 aa  130  1.0000000000000001e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  36.54 
 
 		 239 aa  131  1.0000000000000001e-29  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  33.81 
 
 		 214 aa  130  1.0000000000000001e-29  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  33.82 
 
 		 211 aa  130  2.0000000000000002e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_4639  two component LuxR family transcriptional regulator  39.9 
 
 		 205 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.84039  normal  0.0702904 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  34.09 
 
 		 215 aa  130  2.0000000000000002e-29  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  35.27 
 
 		 216 aa  130  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  30.41 
 
 		 228 aa  130  3e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  36.19 
 
 		 213 aa  130  3e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  36.54 
 
 		 210 aa  129  4.0000000000000003e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  36.54 
 
 		 210 aa  129  4.0000000000000003e-29  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  32.21 
 
 		 206 aa  129  4.0000000000000003e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  33.49 
 
 		 232 aa  129  6e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  36.54 
 
 		 210 aa  128  6e-29  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  32.56 
 
 		 221 aa  128  6e-29  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  29.46 
 
 		 228 aa  129  6e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  128  6e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  128  6e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  34.86 
 
 		 214 aa  129  6e-29  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  128  6e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  35.58 
 
 		 210 aa  128  7.000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  128  8.000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  33.18 
 
 		 214 aa  128  9.000000000000001e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  31.1 
 
 		 223 aa  128  9.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  34.74 
 
 		 221 aa  127  1.0000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  36.54 
 
 		 210 aa  127  1.0000000000000001e-28  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  34.45 
 
 		 212 aa  127  1.0000000000000001e-28  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  33.79 
 
 		 214 aa  127  1.0000000000000001e-28  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  32.21 
 
 		 210 aa  127  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  34.21 
 
 		 237 aa  127  1.0000000000000001e-28  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  36.54 
 
 		 210 aa  127  1.0000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.1 
 
 		 214 aa  127  1.0000000000000001e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  34.42 
 
 		 208 aa  128  1.0000000000000001e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  37.98 
 
 		 215 aa  127  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  33.65 
 
 		 215 aa  127  2.0000000000000002e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  33.02 
 
 		 223 aa  126  2.0000000000000002e-28  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  36.56 
 
 		 226 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  34.26 
 
 		 220 aa  126  2.0000000000000002e-28  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  34.21 
 
 		 237 aa  127  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  35.58 
 
 		 210 aa  127  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  31.1 
 
 		 217 aa  126  3e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  31.73 
 
 		 210 aa  126  3e-28  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  36.41 
 
 		 218 aa  126  3e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  32.69 
 
 		 216 aa  125  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  31.1 
 
 		 218 aa  126  4.0000000000000003e-28  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  37.06 
 
 		 219 aa  125  5e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  29.91 
 
 		 215 aa  125  5e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>