More than 300 homologs were found in PanDaTox collection
for query gene Rmar_1122 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  100 
 
 
234 aa  474  1e-133  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  70.7 
 
 
242 aa  303  2.0000000000000002e-81  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  44 
 
 
234 aa  197  7.999999999999999e-50  Opitutus terrae PB90-1  Bacteria  normal  normal  0.14113 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  44.86 
 
 
217 aa  192  4e-48  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  38.71 
 
 
224 aa  178  8e-44  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  41.74 
 
 
229 aa  175  5e-43  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  42.65 
 
 
223 aa  172  2.9999999999999996e-42  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  39.62 
 
 
274 aa  164  2.0000000000000002e-39  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  36.87 
 
 
217 aa  155  4e-37  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4250  two component LuxR family transcriptional regulator  39.55 
 
 
246 aa  153  2.9999999999999998e-36  Opitutus terrae PB90-1  Bacteria  normal  normal  0.59923 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  36.67 
 
 
217 aa  150  1e-35  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  147  2.0000000000000003e-34  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  146  2.0000000000000003e-34  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  38.35 
 
 
215 aa  145  4.0000000000000006e-34  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  39.9 
 
 
214 aa  144  1e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  34.1 
 
 
222 aa  144  2e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.36 
 
 
215 aa  142  3e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  38.46 
 
 
213 aa  141  8e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  35.48 
 
 
221 aa  141  9e-33  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  35.16 
 
 
226 aa  140  9.999999999999999e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  38.16 
 
 
212 aa  140  1.9999999999999998e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  40.1 
 
 
215 aa  139  3.9999999999999997e-32  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  34.47 
 
 
213 aa  137  1e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  35.78 
 
 
220 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  36.41 
 
 
214 aa  137  2e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  36.41 
 
 
214 aa  137  2e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  36.41 
 
 
214 aa  137  2e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  35.85 
 
 
235 aa  136  2e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  35.1 
 
 
214 aa  135  4e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  36.89 
 
 
214 aa  135  7.000000000000001e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_007511  Bcep18194_B2713  two component LuxR family transcriptional regulator  36.95 
 
 
216 aa  135  8e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  38.46 
 
 
209 aa  134  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  35.92 
 
 
214 aa  134  9.999999999999999e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.05 
 
 
214 aa  134  9.999999999999999e-31  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  35.92 
 
 
214 aa  134  9.999999999999999e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  37.68 
 
 
208 aa  134  9.999999999999999e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  36.06 
 
 
216 aa  134  1.9999999999999998e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  35.75 
 
 
215 aa  134  1.9999999999999998e-30  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  36.23 
 
 
214 aa  134  1.9999999999999998e-30  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010524  Lcho_1400  two component LuxR family transcriptional regulator  35.96 
 
 
205 aa  133  1.9999999999999998e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  32.7 
 
 
208 aa  132  3e-30  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  33.98 
 
 
210 aa  132  3e-30  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  33.98 
 
 
210 aa  132  3e-30  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  35.92 
 
 
213 aa  133  3e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.53826 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  34.29 
 
 
218 aa  132  5e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.972408 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.17 
 
 
214 aa  131  6.999999999999999e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  35.44 
 
 
215 aa  130  1.0000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  34.95 
 
 
215 aa  131  1.0000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  37.62 
 
 
216 aa  131  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  36.84 
 
 
215 aa  130  2.0000000000000002e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.62 
 
 
206 aa  130  2.0000000000000002e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  35.75 
 
 
210 aa  130  2.0000000000000002e-29  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  38.46 
 
 
214 aa  130  2.0000000000000002e-29  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_010505  Mrad2831_3393  two component LuxR family transcriptional regulator  35.14 
 
 
224 aa  130  2.0000000000000002e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0944476 
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  34.26 
 
 
282 aa  129  3e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  36.89 
 
 
214 aa  129  3e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.10411 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.02 
 
 
216 aa  129  3e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  35.4 
 
 
233 aa  129  3e-29  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  37.02 
 
 
215 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  34.29 
 
 
215 aa  129  4.0000000000000003e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  35.65 
 
 
214 aa  129  4.0000000000000003e-29  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  37.8 
 
 
213 aa  129  4.0000000000000003e-29  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  34.95 
 
 
211 aa  129  4.0000000000000003e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  35.1 
 
 
229 aa  129  5.0000000000000004e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  34.78 
 
 
215 aa  128  6e-29  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  34.78 
 
 
224 aa  129  6e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  33.01 
 
 
223 aa  128  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  35.61 
 
 
220 aa  128  8.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.55611 
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  34.78 
 
 
215 aa  128  9.000000000000001e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  34.78 
 
 
215 aa  128  9.000000000000001e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  34.78 
 
 
215 aa  128  9.000000000000001e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  34.78 
 
 
215 aa  128  9.000000000000001e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  34.78 
 
 
209 aa  127  1.0000000000000001e-28  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  34.78 
 
 
209 aa  127  1.0000000000000001e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  36.54 
 
 
216 aa  127  1.0000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  34.78 
 
 
209 aa  127  1.0000000000000001e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  37.13 
 
 
226 aa  127  1.0000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  33.8 
 
 
213 aa  127  1.0000000000000001e-28  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  35.92 
 
 
216 aa  127  1.0000000000000001e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  37.5 
 
 
244 aa  127  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  34.95 
 
 
218 aa  127  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  37.62 
 
 
216 aa  127  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  34.76 
 
 
231 aa  127  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  33.82 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  36.32 
 
 
221 aa  127  2.0000000000000002e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  36.28 
 
 
220 aa  127  2.0000000000000002e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  34.78 
 
 
215 aa  126  2.0000000000000002e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  34.78 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal 
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  33.82 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  34.78 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.329832 
 
 
-
 
NC_009485  BBta_4639  two component LuxR family transcriptional regulator  37.75 
 
 
205 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.84039  normal  0.0702904 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  34.78 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  33.82 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  36.71 
 
 
239 aa  126  2.0000000000000002e-28  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  34.3 
 
 
215 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
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