18 homologs were found in PanDaTox collection
for query gene Rleg_3527 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012850  Rleg_3527  transcriptional regulator, XRE family  100 
 
 		 178 aa  354  2.9999999999999997e-97  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00697962  normal  1 
 
 
-
 
NC_008463  PA14_40210  hypothetical protein  51.15 
 
 		 184 aa  152  2.9999999999999998e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.244823  normal  1 
 
 
-
 
NC_009656  PSPA7_3407  hypothetical protein  47.13 
 
 		 184 aa  142  2e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.163111  n/a   
 
 
-
 
NC_010322  PputGB1_3723  hypothetical protein  45.18 
 
 		 168 aa  140  7e-33  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.00883252  normal  1 
 
 
-
 
NC_010552  BamMC406_4893  XRE family transcriptional regulator  47.43 
 
 		 185 aa  140  9.999999999999999e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.000997693 
 
 
-
 
NC_010086  Bmul_3665  XRE family transcriptional regulator  46.55 
 
 		 185 aa  139  1.9999999999999998e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.855806  normal  1 
 
 
-
 
NC_008391  Bamb_4376  XRE family transcriptional regulator  46.86 
 
 		 185 aa  139  3e-32  Burkholderia ambifaria AMMD  Bacteria  normal  1  hitchhiker  0.00948369 
 
 
-
 
NC_007511  Bcep18194_B0729  XRE family transcriptional regulator  46.86 
 
 		 188 aa  138  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.495438  normal  0.182523 
 
 
-
 
NC_008543  Bcen2424_4951  XRE family transcriptional regulator  46.86 
 
 		 188 aa  138  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.0587865 
 
 
-
 
NC_008061  Bcen_3417  XRE family transcriptional regulator  46.86 
 
 		 188 aa  138  4.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.913782  n/a   
 
 
-
 
NC_010515  Bcenmc03_5335  XRE family transcriptional regulator  46.86 
 
 		 188 aa  137  1e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0324234 
 
 
-
 
NC_007492  Pfl01_2366  XRE family transcriptional regulator  44.93 
 
 		 117 aa  60.5  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.0934629 
 
 
-
 
NC_008553  Mthe_1446  XRE family transcriptional regulator  34.18 
 
 		 334 aa  47  0.0001  Methanosaeta thermophila PT  Archaea  normal  0.952233  n/a   
 
 
-
 
NC_013171  Apre_0797  transcriptional regulator, XRE family  43.14 
 
 		 206 aa  45.8  0.0004  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.028007  n/a   
 
 
-
 
NC_012856  Rpic12D_2696  transcriptional regulator, XRE family  46.3 
 
 		 117 aa  45.1  0.0006  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_4388  helix-turn-helix domain-containing protein  41.67 
 
 		 355 aa  42.7  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2578  XRE family transcriptional regulator  30.15 
 
 		 206 aa  42  0.004  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_2248  transcriptional regulator, XRE family  34.48 
 
 		 116 aa  42  0.005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00529166 
 
 
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