297 homologs were found in PanDaTox collection
for query gene Rleg_2944 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  100 
 
 
246 aa  500  1e-141  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  92.89 
 
 
239 aa  460  9.999999999999999e-129  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  49.57 
 
 
244 aa  236  2e-61  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  43.46 
 
 
254 aa  211  7e-54  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  42.86 
 
 
243 aa  201  9.999999999999999e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  41.18 
 
 
247 aa  200  1.9999999999999998e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  40 
 
 
245 aa  195  5.000000000000001e-49  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  42.27 
 
 
234 aa  191  8e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  37.83 
 
 
248 aa  185  4e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  41.63 
 
 
247 aa  179  4e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  41.63 
 
 
249 aa  178  5.999999999999999e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  37.95 
 
 
244 aa  178  7e-44  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  37.95 
 
 
244 aa  177  1e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  41.52 
 
 
246 aa  177  1e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  37.95 
 
 
244 aa  177  1e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  39.29 
 
 
246 aa  175  6e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  41.35 
 
 
255 aa  173  1.9999999999999998e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  40.72 
 
 
247 aa  173  1.9999999999999998e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  42.42 
 
 
259 aa  171  9e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  38.18 
 
 
250 aa  170  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  42.86 
 
 
249 aa  169  3e-41  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  42.86 
 
 
249 aa  169  3e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  42.08 
 
 
249 aa  167  1e-40  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  39.27 
 
 
384 aa  165  6.9999999999999995e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  37.95 
 
 
259 aa  164  1.0000000000000001e-39  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  39.09 
 
 
255 aa  161  7e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  37.33 
 
 
293 aa  160  2e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  38.14 
 
 
259 aa  160  2e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  38.14 
 
 
259 aa  160  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  36.16 
 
 
243 aa  160  2e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  40.89 
 
 
257 aa  159  3e-38  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  37.04 
 
 
225 aa  159  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  34.29 
 
 
241 aa  159  6e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  36.44 
 
 
255 aa  158  6e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  38.64 
 
 
254 aa  158  7e-38  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  39.11 
 
 
299 aa  158  9e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  38.81 
 
 
384 aa  157  1e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  36.73 
 
 
317 aa  155  4e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  36.7 
 
 
298 aa  155  5.0000000000000005e-37  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  40.69 
 
 
236 aa  153  2.9999999999999998e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  36.16 
 
 
246 aa  152  5e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  37.61 
 
 
376 aa  150  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  36.77 
 
 
255 aa  150  1e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  36.52 
 
 
268 aa  150  2e-35  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  33.64 
 
 
247 aa  149  4e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  41.03 
 
 
281 aa  146  3e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  37.73 
 
 
244 aa  145  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  35.75 
 
 
243 aa  145  7.0000000000000006e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  37.27 
 
 
244 aa  145  8.000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  33.65 
 
 
263 aa  144  9e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  34.55 
 
 
307 aa  140  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  36.8 
 
 
315 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  29.36 
 
 
267 aa  135  8e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  35.5 
 
 
242 aa  133  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  39.56 
 
 
281 aa  132  3.9999999999999996e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  33.65 
 
 
274 aa  131  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  32.13 
 
 
226 aa  129  3e-29  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  31.36 
 
 
243 aa  125  7e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  36.55 
 
 
263 aa  124  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  30.3 
 
 
246 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  30.3 
 
 
246 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  31.84 
 
 
263 aa  111  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  32.75 
 
 
243 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  32.85 
 
 
243 aa  107  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  31.19 
 
 
262 aa  102  6e-21  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  29.61 
 
 
286 aa  101  1e-20  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  28.7 
 
 
241 aa  99.4  5e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  30.88 
 
 
240 aa  98.6  8e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  30.47 
 
 
257 aa  98.2  1e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  28.9 
 
 
245 aa  97.8  1e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  31.28 
 
 
250 aa  97.4  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  31.15 
 
 
246 aa  96.3  4e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  29.84 
 
 
250 aa  96.3  4e-19  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  28.04 
 
 
242 aa  93.6  2e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  31.28 
 
 
250 aa  94  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  30.85 
 
 
252 aa  93.6  3e-18  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  27.85 
 
 
276 aa  89.4  4e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  28.37 
 
 
250 aa  89  7e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_010511  M446_5658  cyclic nucleotide-binding protein  25.74 
 
 
245 aa  88.6  8e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.57 
 
 
253 aa  88.6  9e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  27.1 
 
 
242 aa  87  2e-16  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  30.69 
 
 
230 aa  87  3e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  28.84 
 
 
249 aa  84.7  0.000000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  29.58 
 
 
256 aa  85.1  0.000000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  24.79 
 
 
252 aa  84.3  0.000000000000002  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  24.79 
 
 
252 aa  84.3  0.000000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  30.23 
 
 
256 aa  84.3  0.000000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  26.16 
 
 
243 aa  83.6  0.000000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  28.87 
 
 
240 aa  83.2  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  28.37 
 
 
249 aa  83.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  27.51 
 
 
252 aa  83.2  0.000000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  26.15 
 
 
250 aa  81.3  0.00000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  28.08 
 
 
262 aa  80.5  0.00000000000002  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal 
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  28.84 
 
 
249 aa  80.5  0.00000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  27.06 
 
 
235 aa  80.9  0.00000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  27.23 
 
 
248 aa  80.5  0.00000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  27.23 
 
 
248 aa  80.5  0.00000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  28.43 
 
 
249 aa  79.7  0.00000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  31.82 
 
 
241 aa  78.2  0.0000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  27.23 
 
 
253 aa  77.8  0.0000000000002  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
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