More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5981 on replicon NC_011366
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011366  Rleg2_5981  cyclic nucleotide-binding protein  100 
 
 
155 aa  314  3e-85  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  96.77 
 
 
155 aa  305  1.0000000000000001e-82  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_011988  Avi_5607  cAMP-dependent protein kinase regulatory subunit  80 
 
 
154 aa  250  7e-66  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4601  cyclic nucleotide-binding protein  72 
 
 
154 aa  227  6e-59  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.930738 
 
 
-
 
NC_011989  Avi_3942  cAMP-dependent protein kinase regulatory subunit  48.32 
 
 
154 aa  153  9e-37  Agrobacterium vitis S4  Bacteria  normal  0.644852  n/a   
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  48.65 
 
 
151 aa  145  2.0000000000000003e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  48.65 
 
 
148 aa  144  4.0000000000000006e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  47.62 
 
 
147 aa  143  1e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  44.37 
 
 
149 aa  129  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  43.66 
 
 
149 aa  124  4.0000000000000003e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  43.66 
 
 
194 aa  124  5e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_009720  Xaut_1892  cyclic nucleotide-binding protein  42.86 
 
 
147 aa  116  9.999999999999999e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.326195  normal 
 
 
-
 
NC_008554  Sfum_3249  cyclic nucleotide-binding protein  35 
 
 
171 aa  100  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR2005  cyclic nucleotide-binding protein  33.87 
 
 
153 aa  87.4  6e-17  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1928  cyclic nucleotide-binding protein  33.87 
 
 
153 aa  87.8  6e-17  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1291  cyclic nucleotide-binding protein  33.8 
 
 
164 aa  87.4  7e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.234039  normal 
 
 
-
 
NC_011369  Rleg2_3764  cyclic nucleotide-binding protein  35.1 
 
 
151 aa  85.9  2e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0964  cyclic nucleotide-binding protein  33.06 
 
 
152 aa  84.3  5e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4089  putative transcriptional regulator, Crp/Fnr family  33.77 
 
 
151 aa  84  8e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.998394  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  32.61 
 
 
243 aa  80.9  0.000000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  31.85 
 
 
219 aa  76.3  0.0000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  29.41 
 
 
563 aa  76.6  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  27.7 
 
 
570 aa  76.3  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0086  cyclic nucleotide-binding protein  31.29 
 
 
160 aa  75.5  0.0000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.929528  normal  0.0740226 
 
 
-
 
NC_011666  Msil_0331  cyclic nucleotide-binding protein  34.67 
 
 
150 aa  73.6  0.000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0211845 
 
 
-
 
NC_014248  Aazo_1954  putative Crp/Fnr family transcriptional regulator  29.5 
 
 
141 aa  73.2  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_4030  cyclic nucleotide-binding protein  23.65 
 
 
173 aa  72.4  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.900362 
 
 
-
 
NC_009636  Smed_3055  cyclic nucleotide-binding protein  33.07 
 
 
151 aa  71.6  0.000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.517471  normal 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  31.82 
 
 
224 aa  70.9  0.000000000006  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_009439  Pmen_0998  cyclic nucleotide-binding protein  35.14 
 
 
265 aa  70.5  0.000000000008  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00000000222196  unclonable  1.0277600000000001e-18 
 
 
-
 
NC_011757  Mchl_1854  cyclic nucleotide-binding protein  29.45 
 
 
155 aa  70.1  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.795804 
 
 
-
 
NC_010172  Mext_1575  cyclic nucleotide-binding  30.61 
 
 
155 aa  69.7  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.6817  normal  0.0500798 
 
 
-
 
NC_007925  RPC_0279  cyclic nucleotide-binding domain-containing protein  30.61 
 
 
149 aa  70.1  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.294504 
 
 
-
 
NC_009523  RoseRS_3166  cyclic nucleotide-binding protein  33.6 
 
 
482 aa  70.1  0.00000000001  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.00363184  normal 
 
 
-
 
NC_009767  Rcas_2894  cyclic nucleotide-binding protein  33.6 
 
 
482 aa  70.1  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00660929  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  30.94 
 
 
225 aa  68.9  0.00000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007964  Nham_0093  cyclic nucleotide-binding domain-containing protein  31.29 
 
 
149 aa  68.6  0.00000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.132878  n/a   
 
 
-
 
NC_010725  Mpop_1664  cyclic nucleotide-binding protein  29.05 
 
 
159 aa  68.9  0.00000000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.617914 
 
 
-
 
NC_008254  Meso_3425  cyclic nucleotide-binding protein  29.1 
 
 
151 aa  68.6  0.00000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30.94 
 
 
225 aa  68.6  0.00000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62260  hypothetical protein  34.23 
 
 
265 aa  68.2  0.00000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000000560596  normal  0.205453 
 
 
-
 
NC_009656  PSPA7_5420  hypothetical protein  34.23 
 
 
265 aa  68.2  0.00000000004  Pseudomonas aeruginosa PA7  Bacteria  hitchhiker  0.00117771  n/a   
 
 
-
 
NC_007413  Ava_3692  cyclic nucleotide-binding domain-containing protein  28.91 
 
 
146 aa  67.8  0.00000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0841  cyclic nucleotide-binding protein  26.72 
 
 
160 aa  67.8  0.00000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.108052 
 
 
-
 
NC_008009  Acid345_4730  cyclic nucleotide-binding protein  31.78 
 
 
286 aa  67.4  0.00000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.813554  normal  0.722063 
 
 
-
 
NC_007298  Daro_3546  cyclic nucleotide-binding  33.04 
 
 
124 aa  67.4  0.00000000007  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.194157 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  31.71 
 
 
229 aa  66.2  0.0000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.68 
 
 
225 aa  66.6  0.0000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  27.59 
 
 
222 aa  66.2  0.0000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  30.3 
 
 
231 aa  66.2  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  27.89 
 
 
161 aa  65.5  0.0000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_002967  TDE1298  cyclic nucleotide binding domain-containing protein  28.68 
 
 
177 aa  65.1  0.0000000003  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.000825589  n/a   
 
 
-
 
NC_009565  TBFG_12585  hypothetical protein  30.99 
 
 
583 aa  65.1  0.0000000003  Mycobacterium tuberculosis F11  Bacteria  normal  0.274213  normal  0.619754 
 
 
-
 
NC_007519  Dde_0723  cyclic nucleotide-binding domain-containing protein  26.77 
 
 
173 aa  65.5  0.0000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  33.82 
 
 
225 aa  65.1  0.0000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  30.07 
 
 
228 aa  65.5  0.0000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_009077  Mjls_2527  cyclic nucleotide-binding protein  31.93 
 
 
143 aa  64.7  0.0000000004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.122265 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  31.06 
 
 
234 aa  65.1  0.0000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008146  Mmcs_2490  cyclic nucleotide-binding protein  31.93 
 
 
143 aa  64.7  0.0000000004  Mycobacterium sp. MCS  Bacteria  normal  0.529165  n/a   
 
 
-
 
NC_008705  Mkms_2535  cyclic nucleotide-binding protein  31.93 
 
 
143 aa  64.7  0.0000000004  Mycobacterium sp. KMS  Bacteria  normal  0.187626  normal  0.577012 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.68 
 
 
242 aa  64.3  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  31.54 
 
 
220 aa  64.3  0.0000000006  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  28.99 
 
 
225 aa  64.3  0.0000000006  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013440  Hoch_3368  putative transcriptional regulator, Crp/Fnr family  28.91 
 
 
503 aa  64.3  0.0000000007  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.00879958  normal  0.135189 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  28.97 
 
 
252 aa  63.9  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_009565  TBFG_13760  hypothetical protein  36.05 
 
 
1065 aa  63.9  0.0000000008  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.217439 
 
 
-
 
NC_011989  Avi_4229  hypothetical protein  27.63 
 
 
151 aa  63.5  0.0000000009  Agrobacterium vitis S4  Bacteria  unclonable  0.000114025  n/a   
 
 
-
 
NC_010505  Mrad2831_0617  cyclic nucleotide-binding protein  34.34 
 
 
577 aa  63.5  0.0000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.68 
 
 
225 aa  63.2  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  28.35 
 
 
219 aa  63.5  0.000000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_009720  Xaut_2796  cyclic nucleotide-binding protein  28.35 
 
 
453 aa  63.5  0.000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.180681  normal  0.733886 
 
 
-
 
NC_009439  Pmen_2946  cyclic nucleotide-binding protein  29.57 
 
 
369 aa  63.5  0.000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.360561  normal  0.390891 
 
 
-
 
NC_002967  TDE2725  cyclic nucleotide binding/GGDEF domain-containing protein  25.53 
 
 
322 aa  62.4  0.000000002  Treponema denticola ATCC 35405  Bacteria  normal  0.792666  n/a   
 
 
-
 
NC_011894  Mnod_1016  cyclic nucleotide-binding protein  31.58 
 
 
149 aa  62.4  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  27.41 
 
 
226 aa  62.8  0.000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  27.21 
 
 
222 aa  62.8  0.000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_013037  Dfer_1108  putative transcriptional regulator, Crp/Fnr family  29.01 
 
 
1075 aa  62.8  0.000000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000733786  normal  0.267995 
 
 
-
 
NC_009972  Haur_0491  cyclic nucleotide-binding protein  32.81 
 
 
410 aa  62.4  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0215963  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  28.89 
 
 
224 aa  61.6  0.000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  30.07 
 
 
227 aa  61.6  0.000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_008554  Sfum_4027  cyclic nucleotide-binding protein  31.85 
 
 
413 aa  62  0.000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  28.03 
 
 
225 aa  61.6  0.000000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1915  cyclic nucleotide-binding protein  38.84 
 
 
329 aa  61.6  0.000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.379435  normal  0.183424 
 
 
-
 
NC_007958  RPD_0441  cyclic nucleotide-binding  28.57 
 
 
148 aa  60.8  0.000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.309044  normal  0.811617 
 
 
-
 
NC_009767  Rcas_3910  cyclic nucleotide-binding protein  28.24 
 
 
167 aa  60.8  0.000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.34683  normal  0.175845 
 
 
-
 
NC_007778  RPB_0380  cyclic nucleotide-binding domain-containing protein  30.65 
 
 
148 aa  60.5  0.000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  29.66 
 
 
225 aa  60.5  0.000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1814  cyclic nucleotide-binding domain-containing protein  28.47 
 
 
242 aa  60.5  0.000000009  Synechococcus elongatus PCC 7942  Bacteria  normal  0.38579  normal  0.245711 
 
 
-
 
NC_009485  BBta_5447  voltage-dependent potassium channel  30.61 
 
 
409 aa  60.1  0.00000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.532768  normal  0.0697598 
 
 
-
 
BN001303  ANIA_04987  cAMP-dependent protein kinase regulatory subunit (PKA regulatory subunit) [Source:UniProtKB/Swiss-Prot;Acc:O59922]  31.86 
 
 
412 aa  60.5  0.00000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.599779  normal  0.51731 
 
 
-
 
NC_009972  Haur_3689  cyclic nucleotide-binding protein  29.93 
 
 
454 aa  59.7  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.120597  n/a   
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  27.27 
 
 
229 aa  60.1  0.00000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.41 
 
 
228 aa  59.7  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13268  transmembrane transport protein  30.77 
 
 
1048 aa  59.7  0.00000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.321047 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  30.37 
 
 
222 aa  60.1  0.00000001  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  28.57 
 
 
226 aa  59.3  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_007604  Synpcc7942_0664  cyclic nucleotide-binding  29.2 
 
 
449 aa  59.3  0.00000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0101822  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  32.35 
 
 
225 aa  59.3  0.00000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009523  RoseRS_3727  cyclic nucleotide-binding protein  29.41 
 
 
167 aa  59.3  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00887093 
 
 
-
 
NC_008726  Mvan_4818  cyclic nucleotide-binding protein  36.36 
 
 
332 aa  59.7  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0931859  normal  0.928656 
 
 
-
 
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