More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5185 on replicon NC_011368
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  100 
 
 
285 aa  572  1.0000000000000001e-162  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  63.02 
 
 
265 aa  342  4e-93  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  61.89 
 
 
271 aa  338  5e-92  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  61.57 
 
 
269 aa  337  1.9999999999999998e-91  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  62.84 
 
 
269 aa  333  2e-90  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  62.26 
 
 
266 aa  333  2e-90  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  61.13 
 
 
266 aa  331  8e-90  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  61.13 
 
 
266 aa  331  9e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  62.31 
 
 
271 aa  328  7e-89  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  61.51 
 
 
266 aa  327  1.0000000000000001e-88  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  60 
 
 
281 aa  327  1.0000000000000001e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  60 
 
 
281 aa  327  1.0000000000000001e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  60.38 
 
 
266 aa  326  3e-88  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  61.92 
 
 
270 aa  324  1e-87  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  62.84 
 
 
266 aa  324  1e-87  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  61.15 
 
 
270 aa  323  2e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  65.02 
 
 
269 aa  318  5e-86  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  60.15 
 
 
269 aa  313  9.999999999999999e-85  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  58.78 
 
 
270 aa  306  3e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  59.62 
 
 
266 aa  293  2e-78  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  56.06 
 
 
265 aa  290  2e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  59.46 
 
 
266 aa  288  8e-77  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  57.69 
 
 
270 aa  286  2.9999999999999996e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  54.17 
 
 
264 aa  285  5e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  55.56 
 
 
265 aa  284  9e-76  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  57.85 
 
 
262 aa  281  6.000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  57.47 
 
 
262 aa  277  1e-73  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  57.47 
 
 
263 aa  276  3e-73  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  56.39 
 
 
271 aa  272  5.000000000000001e-72  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  48.28 
 
 
265 aa  257  1e-67  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  51.95 
 
 
265 aa  255  6e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  50.2 
 
 
265 aa  246  4e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  52.51 
 
 
269 aa  245  6e-64  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  48.46 
 
 
266 aa  244  9.999999999999999e-64  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  48.86 
 
 
264 aa  241  1e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  47.29 
 
 
266 aa  237  1e-61  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  46.92 
 
 
266 aa  232  6e-60  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  44.53 
 
 
266 aa  229  3e-59  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  47.88 
 
 
264 aa  229  3e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  59.49 
 
 
199 aa  229  5e-59  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  47.92 
 
 
261 aa  228  7e-59  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  47.06 
 
 
267 aa  224  1e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  45.28 
 
 
260 aa  222  4.9999999999999996e-57  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  44.87 
 
 
267 aa  222  6e-57  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  44.02 
 
 
264 aa  221  1.9999999999999999e-56  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  46.33 
 
 
260 aa  218  1e-55  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  46.54 
 
 
260 aa  216  2.9999999999999998e-55  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  46.21 
 
 
262 aa  214  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  47.08 
 
 
262 aa  213  2.9999999999999995e-54  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  46.69 
 
 
262 aa  212  5.999999999999999e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  44.23 
 
 
264 aa  209  4e-53  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  44.23 
 
 
264 aa  209  5e-53  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  44.61 
 
 
262 aa  207  2e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  42.59 
 
 
262 aa  206  4e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  44.15 
 
 
287 aa  201  1.9999999999999998e-50  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  50.97 
 
 
264 aa  196  5.000000000000001e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  41.79 
 
 
268 aa  192  6e-48  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  45.49 
 
 
262 aa  190  2e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.9 
 
 
257 aa  187  2e-46  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  41.2 
 
 
263 aa  180  2e-44  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  38.91 
 
 
269 aa  176  3e-43  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  39.53 
 
 
283 aa  164  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  35.96 
 
 
255 aa  146  3e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  34.14 
 
 
269 aa  145  7.0000000000000006e-34  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  36.32 
 
 
269 aa  145  1e-33  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  39.39 
 
 
253 aa  143  4e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  37.67 
 
 
258 aa  142  5e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  35.81 
 
 
259 aa  139  4.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  37.99 
 
 
252 aa  137  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  34.47 
 
 
296 aa  134  9.999999999999999e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  35.65 
 
 
250 aa  134  9.999999999999999e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  36 
 
 
262 aa  134  1.9999999999999998e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.91 
 
 
271 aa  133  3.9999999999999996e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  35.71 
 
 
253 aa  132  5e-30  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  36.56 
 
 
266 aa  132  6e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.44 
 
 
266 aa  132  9e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  40.87 
 
 
263 aa  131  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  36.77 
 
 
249 aa  131  1.0000000000000001e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  33.92 
 
 
272 aa  131  1.0000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  38.11 
 
 
254 aa  130  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  32.19 
 
 
259 aa  127  3e-28  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  40.1 
 
 
261 aa  126  4.0000000000000003e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  32.91 
 
 
259 aa  126  5e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  35.95 
 
 
267 aa  125  9e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  40.31 
 
 
257 aa  125  1e-27  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  35.52 
 
 
360 aa  124  1e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  37.24 
 
 
258 aa  125  1e-27  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  31.51 
 
 
259 aa  124  2e-27  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  37.44 
 
 
264 aa  124  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  39.68 
 
 
264 aa  124  2e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  37.23 
 
 
291 aa  123  3e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  39.59 
 
 
261 aa  123  3e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.31 
 
 
263 aa  122  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  36.4 
 
 
259 aa  121  9.999999999999999e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  32.05 
 
 
264 aa  121  1.9999999999999998e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  34.2 
 
 
262 aa  120  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  32.44 
 
 
267 aa  120  3e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.65 
 
 
264 aa  120  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  32.44 
 
 
267 aa  119  3.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  32.44 
 
 
267 aa  119  3.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
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