More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_1440 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  100 
 
 
277 aa  570  1.0000000000000001e-162  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  90.25 
 
 
277 aa  525  1e-148  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  68.9 
 
 
282 aa  373  1e-102  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_007643  Rru_A0729  Short-chain dehydrogenase/reductase SDR  49.21 
 
 
259 aa  221  9.999999999999999e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503076  n/a   
 
 
-
 
NC_010581  Bind_1222  short-chain dehydrogenase/reductase SDR  44.31 
 
 
258 aa  215  5.9999999999999996e-55  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.461582  normal 
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  46 
 
 
249 aa  208  9e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_011666  Msil_0375  short-chain dehydrogenase/reductase SDR  45.02 
 
 
254 aa  204  1e-51  Methylocella silvestris BL2  Bacteria  n/a    normal  0.187579 
 
 
-
 
NC_009484  Acry_1727  short-chain dehydrogenase/reductase SDR  45.42 
 
 
265 aa  201  8e-51  Acidiphilium cryptum JF-5  Bacteria  normal  0.218017  n/a   
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  42.4 
 
 
260 aa  190  2.9999999999999997e-47  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  42.4 
 
 
260 aa  189  4e-47  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  44.3 
 
 
256 aa  186  4e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1889  short-chain dehydrogenase/reductase SDR  39.92 
 
 
256 aa  176  5e-43  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1059  short-chain dehydrogenase/reductase SDR  39.64 
 
 
300 aa  175  8e-43  Thauera sp. MZ1T  Bacteria  normal  0.261261  n/a   
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  39.92 
 
 
258 aa  174  9.999999999999999e-43  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5880  short-chain dehydrogenase/reductase SDR  40.82 
 
 
263 aa  168  7e-41  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.195504 
 
 
-
 
NC_008781  Pnap_1455  short-chain dehydrogenase/reductase SDR  40.96 
 
 
260 aa  163  3e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271159  normal 
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  40.08 
 
 
260 aa  161  1e-38  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_007963  Csal_0463  short-chain dehydrogenase/reductase SDR  40.51 
 
 
264 aa  159  4e-38  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0468  short-chain dehydrogenase/reductase SDR  38.87 
 
 
257 aa  158  7e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0496  Short-chain dehydrogenase/reductase SDR  40.24 
 
 
251 aa  157  2e-37  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.661007 
 
 
-
 
NC_010501  PputW619_3172  short-chain dehydrogenase/reductase SDR  36.63 
 
 
250 aa  156  3e-37  Pseudomonas putida W619  Bacteria  normal  0.0471693  normal 
 
 
-
 
NC_008825  Mpe_A0230  hypothetical protein  39.04 
 
 
261 aa  156  4e-37  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.599536 
 
 
-
 
NC_002947  PP_2737  short chain dehydrogenase/reductase family oxidoreductase  39.91 
 
 
250 aa  152  7e-36  Pseudomonas putida KT2440  Bacteria  normal  0.420132  normal 
 
 
-
 
NC_010322  PputGB1_2099  short-chain dehydrogenase/reductase SDR  38.63 
 
 
250 aa  152  8e-36  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3016  short-chain dehydrogenase/reductase SDR  39.48 
 
 
250 aa  150  1e-35  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1069  short-chain dehydrogenase/reductase SDR  39.27 
 
 
251 aa  148  8e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  35.37 
 
 
262 aa  145  9e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  39.5 
 
 
238 aa  143  3e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_009428  Rsph17025_2941  short-chain dehydrogenase/reductase SDR  32.55 
 
 
245 aa  142  5e-33  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.19024  normal  0.201158 
 
 
-
 
NC_011138  MADE_01434  Short chain dehydrogenase family protein  36.86 
 
 
239 aa  142  7e-33  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4073  short-chain dehydrogenase/reductase SDR  35.59 
 
 
252 aa  142  7e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.576341  normal 
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  35.66 
 
 
262 aa  141  9.999999999999999e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  32.54 
 
 
243 aa  141  9.999999999999999e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6102  Short-chain dehydrogenase/reductase SDR  36.99 
 
 
264 aa  137  1e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.0605001  n/a   
 
 
-
 
NC_013456  VEA_003864  oxidoreductase short-chain dehydrogenase/reductase family  36.55 
 
 
241 aa  136  3.0000000000000003e-31  Vibrio sp. Ex25  Bacteria  normal  0.013707  n/a   
 
 
-
 
NC_009438  Sputcn32_2712  short-chain dehydrogenase/reductase SDR  39.33 
 
 
275 aa  136  5e-31  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  38.16 
 
 
260 aa  136  5e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  36.25 
 
 
261 aa  134  1.9999999999999998e-30  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2750  short-chain dehydrogenase/reductase SDR  31.76 
 
 
245 aa  132  7.999999999999999e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0379321  normal 
 
 
-
 
NC_007493  RSP_1087  short-chain dehydrogenase/reductase family protein  31.76 
 
 
245 aa  132  7.999999999999999e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.3765  n/a   
 
 
-
 
NC_007954  Sden_3371  short-chain dehydrogenase/reductase SDR  36.13 
 
 
239 aa  131  1.0000000000000001e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2097  short-chain dehydrogenase/reductase SDR  36.55 
 
 
238 aa  130  2.0000000000000002e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.434652  n/a   
 
 
-
 
NC_009457  VC0395_A0637  short chain dehydrogenase  33.2 
 
 
241 aa  130  3e-29  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000368636  n/a   
 
 
-
 
NC_008709  Ping_1000  short-chain dehydrogenase/reductase SDR  35.1 
 
 
240 aa  129  6e-29  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  33.47 
 
 
242 aa  128  8.000000000000001e-29  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3307  short chain dehydrogenase  36.43 
 
 
261 aa  128  1.0000000000000001e-28  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0864591  n/a   
 
 
-
 
NC_011206  Lferr_2904  short chain dehydrogenase  36.43 
 
 
261 aa  128  1.0000000000000001e-28  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000166666  decreased coverage  0.000436169 
 
 
-
 
NC_008044  TM1040_0408  short-chain dehydrogenase/reductase SDR  33.19 
 
 
240 aa  128  1.0000000000000001e-28  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4017  short-chain dehydrogenase/reductase SDR  30.59 
 
 
245 aa  127  3e-28  Jannaschia sp. CCS1  Bacteria  normal  0.980517  normal 
 
 
-
 
NC_011988  Avi_5235  oxidoreductase protein  32.48 
 
 
275 aa  126  5e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3209  short-chain dehydrogenase/reductase SDR  38.08 
 
 
266 aa  125  6e-28  Shewanella baltica OS195  Bacteria  normal  normal  0.857449 
 
 
-
 
NC_009783  VIBHAR_01815  short chain dehydrogenase  36.71 
 
 
241 aa  125  8.000000000000001e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_3052  short-chain dehydrogenase/reductase SDR  38.08 
 
 
266 aa  124  1e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1311  short-chain dehydrogenase/reductase SDR  38.08 
 
 
266 aa  124  1e-27  Shewanella baltica OS223  Bacteria  normal  normal  0.978372 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  33.83 
 
 
270 aa  125  1e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1329  short-chain dehydrogenase/reductase SDR  33.61 
 
 
238 aa  123  3e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.371699  n/a   
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  33.47 
 
 
258 aa  123  4e-27  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
NC_007912  Sde_2469  TonB-dependent receptor  34.02 
 
 
265 aa  122  6e-27  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  33.46 
 
 
270 aa  120  1.9999999999999998e-26  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0427  Short-chain dehydrogenase/reductase SDR  35.16 
 
 
256 aa  121  1.9999999999999998e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1490  short-chain dehydrogenase/reductase SDR  35.62 
 
 
239 aa  120  3e-26  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  33.89 
 
 
267 aa  119  3.9999999999999996e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3237  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.85457  n/a   
 
 
-
 
NC_009080  BMA10247_2168  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.408948  n/a   
 
 
-
 
NC_009076  BURPS1106A_3273  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2291  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.448302  n/a   
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  30 
 
 
260 aa  118  7.999999999999999e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3288  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1063  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3066  short-chain dehydrogenase/reductase SDR  36.86 
 
 
266 aa  119  7.999999999999999e-26  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0537  short chain dehydrogenase/reductase family oxidoreductase  32.53 
 
 
262 aa  119  7.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.618923  n/a   
 
 
-
 
NC_009092  Shew_1481  short-chain dehydrogenase/reductase SDR  34.27 
 
 
240 aa  118  9e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4782  short chain dehydrogenase  32.82 
 
 
264 aa  117  1.9999999999999998e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1238  short-chain dehydrogenase/reductase SDR  35.2 
 
 
266 aa  117  1.9999999999999998e-25  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1178  short-chain dehydrogenase/reductase SDR  33.06 
 
 
239 aa  117  1.9999999999999998e-25  Dickeya zeae Ech1591  Bacteria  normal  0.300792  n/a   
 
 
-
 
NC_010002  Daci_6048  short chain dehydrogenase  31.15 
 
 
266 aa  116  3e-25  Delftia acidovorans SPH-1  Bacteria  normal  0.549002  normal 
 
 
-
 
NC_008321  Shewmr4_1167  short-chain dehydrogenase/reductase SDR  35.6 
 
 
266 aa  117  3e-25  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0151  short chain dehydrogenase  34.11 
 
 
261 aa  115  6.9999999999999995e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1168  short-chain dehydrogenase/reductase SDR  35.63 
 
 
266 aa  115  6.9999999999999995e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0813  short chain dehydrogenase/reductase family oxidoreductase  34.55 
 
 
253 aa  115  6.9999999999999995e-25  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3312  short-chain dehydrogenase/reductase SDR  30 
 
 
260 aa  114  1.0000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3382  short chain dehydrogenase/reductase family oxidoreductase  34.65 
 
 
266 aa  114  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3863  short chain dehydrogenase  34.29 
 
 
260 aa  114  2.0000000000000002e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.331172  normal 
 
 
-
 
NC_011885  Cyan7425_0107  short-chain dehydrogenase/reductase SDR  33.84 
 
 
258 aa  114  2.0000000000000002e-24  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A3806  short chain dehydrogenase  34.85 
 
 
260 aa  113  4.0000000000000004e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.187681 
 
 
-
 
NC_007947  Mfla_2676  short chain dehydrogenase  33.19 
 
 
264 aa  112  9e-24  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.989358 
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  37.43 
 
 
248 aa  111  1.0000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  32.03 
 
 
255 aa  111  1.0000000000000001e-23  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  30.2 
 
 
245 aa  110  2.0000000000000002e-23  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_007347  Reut_A0130  short chain dehydrogenase  31.45 
 
 
265 aa  110  3e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.727225  n/a   
 
 
-
 
NC_010524  Lcho_0185  short chain dehydrogenase  31.15 
 
 
267 aa  110  3e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_1352  short-chain dehydrogenase/reductase SDR  36.9 
 
 
282 aa  110  3e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.316546  normal  0.241504 
 
 
-
 
NC_008345  Sfri_3034  short-chain dehydrogenase/reductase SDR  34.85 
 
 
249 aa  109  4.0000000000000004e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.377805  n/a   
 
 
-
 
NC_012850  Rleg_3769  3-ketoacyl-(acyl-carrier-protein) reductase  37.3 
 
 
259 aa  109  6e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.988142 
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  31.54 
 
 
256 aa  108  7.000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1031  short-chain dehydrogenase/reductase SDR  38.42 
 
 
248 aa  108  9.000000000000001e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.961994  normal  0.547574 
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  32.39 
 
 
267 aa  108  9.000000000000001e-23  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_007493  RSP_2371  3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR  36.22 
 
 
248 aa  108  1e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  36.07 
 
 
238 aa  107  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  35.07 
 
 
233 aa  107  2e-22  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
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