More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2384 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  59.13 
 
 
622 aa  717    Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  59.74 
 
 
625 aa  714    Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  57.37 
 
 
609 aa  651    Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  57.05 
 
 
609 aa  641    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  58.32 
 
 
618 aa  705    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  67.15 
 
 
617 aa  824    Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  56.73 
 
 
609 aa  656    Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  77.6 
 
 
617 aa  986    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  76.28 
 
 
642 aa  975    Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  60.62 
 
 
608 aa  734    Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  100 
 
 
618 aa  1275    Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  57.05 
 
 
609 aa  662    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  59.46 
 
 
622 aa  717    Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  79.69 
 
 
627 aa  1011    Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  75.86 
 
 
563 aa  813    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  74.8 
 
 
652 aa  979    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  58.95 
 
 
619 aa  701    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  57.05 
 
 
609 aa  641    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  76.6 
 
 
619 aa  983    Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  75.72 
 
 
645 aa  957    Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  56.89 
 
 
609 aa  643    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  55.23 
 
 
599 aa  629  1e-179  Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  54.34 
 
 
598 aa  607  9.999999999999999e-173  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  53.58 
 
 
591 aa  606  9.999999999999999e-173  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  52.89 
 
 
601 aa  602  1.0000000000000001e-171  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  55.28 
 
 
597 aa  599  1e-170  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  52.12 
 
 
588 aa  585  1e-166  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  51.86 
 
 
588 aa  588  1e-166  Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  51.86 
 
 
588 aa  588  1e-166  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  50.89 
 
 
607 aa  574  1.0000000000000001e-162  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  49.52 
 
 
622 aa  548  1e-155  Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  49.92 
 
 
600 aa  545  1e-154  Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50 
 
 
600 aa  543  1e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  49.92 
 
 
600 aa  540  9.999999999999999e-153  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  50.16 
 
 
600 aa  537  1e-151  Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  49.84 
 
 
600 aa  537  1e-151  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  49.19 
 
 
600 aa  533  1e-150  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  49.67 
 
 
592 aa  534  1e-150  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  49.51 
 
 
600 aa  534  1e-150  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  49.35 
 
 
600 aa  533  1e-150  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  48.94 
 
 
606 aa  535  1e-150  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  48.87 
 
 
600 aa  530  1e-149  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  46.96 
 
 
600 aa  523  1e-147  Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  45.73 
 
 
601 aa  520  1e-146  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  47.91 
 
 
598 aa  499  1e-140  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  45.19 
 
 
616 aa  499  1e-140  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  46.46 
 
 
602 aa  498  1e-139  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  46.71 
 
 
599 aa  491  1e-137  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  43.54 
 
 
611 aa  465  1e-129  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
601 aa  452  1e-125  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  41.61 
 
 
601 aa  421  1e-116  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  40.27 
 
 
606 aa  401  9.999999999999999e-111  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  39.46 
 
 
599 aa  385  1e-105  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  37.83 
 
 
601 aa  365  1e-99  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
605 aa  354  2.9999999999999997e-96  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  36.93 
 
 
598 aa  339  9.999999999999999e-92  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  36.81 
 
 
598 aa  336  9e-91  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  39.41 
 
 
603 aa  333  4e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  34.89 
 
 
599 aa  327  4.0000000000000003e-88  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_007969  Pcryo_1452  acyl-CoA dehydrogenase-like  34.78 
 
 
597 aa  327  4.0000000000000003e-88  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  34.68 
 
 
594 aa  326  1e-87  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  35.99 
 
 
598 aa  325  2e-87  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  34.89 
 
 
596 aa  324  2e-87  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  4e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  34.94 
 
 
595 aa  323  4e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  4e-87  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  5e-87  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  5e-87  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  5e-87  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
595 aa  323  5e-87  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  33.99 
 
 
598 aa  323  6e-87  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02316  Acyl-CoA dehydrogenase  33.76 
 
 
599 aa  322  9.999999999999999e-87  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.254784  n/a   
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  35.95 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  36.06 
 
 
592 aa  322  9.999999999999999e-87  Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  34.01 
 
 
619 aa  322  9.999999999999999e-87  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  34.62 
 
 
599 aa  321  1.9999999999999998e-86  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.14 
 
 
598 aa  321  3e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  35.45 
 
 
595 aa  320  3e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  34.62 
 
 
595 aa  320  3.9999999999999996e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  34.62 
 
 
595 aa  320  3.9999999999999996e-86  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  34.62 
 
 
595 aa  320  3.9999999999999996e-86  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  37.04 
 
 
586 aa  320  5e-86  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  34.51 
 
 
595 aa  320  6e-86  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  34.46 
 
 
595 aa  319  9e-86  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  33.55 
 
 
597 aa  319  1e-85  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  36.33 
 
 
592 aa  319  1e-85  Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  35.22 
 
 
592 aa  319  1e-85  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  35.26 
 
 
592 aa  318  2e-85  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  34.16 
 
 
601 aa  318  2e-85  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  35.79 
 
 
595 aa  318  2e-85  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_009092  Shew_1961  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
583 aa  317  4e-85  Shewanella loihica PV-4  Bacteria  unclonable  0.00000164987  hitchhiker  0.00189084 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  37.06 
 
 
601 aa  317  4e-85  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  33.71 
 
 
596 aa  316  8e-85  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_007204  Psyc_0965  putative acyl-CoA dehydrogenase  33.82 
 
 
597 aa  316  9e-85  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.314138 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  35.12 
 
 
592 aa  316  9e-85  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  35.28 
 
 
592 aa  316  9.999999999999999e-85  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  35.44 
 
 
593 aa  315  1.9999999999999998e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  39.25 
 
 
593 aa  315  1.9999999999999998e-84  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  34.68 
 
 
601 aa  313  5.999999999999999e-84  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
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