10 homologs were found in PanDaTox collection
for query gene Rfer_1746 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_1746  PE-PGRS family protein  100 
 
 
248 aa  378  1e-104  Rhodoferax ferrireducens T118  Bacteria  unclonable  0.0000000877581  n/a   
 
 
 
NC_007955  Mbur_2245  hypothetical protein  33.78 
 
 
334 aa  47  0.0003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0176007  n/a   
 
 
-
 
NC_008312  Tery_1623  hypothetical protein  25.26 
 
 
613 aa  46.6  0.0004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.54291  normal 
 
 
-
 
NC_009565  TBFG_12382  PPE family protein  42.47 
 
 
615 aa  43.5  0.003  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000105692  normal 
 
 
-
 
NC_009565  TBFG_12379  PPE family protein  40.2 
 
 
613 aa  43.1  0.004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000086115  normal 
 
 
-
 
NC_011374  UUR10_0415  multiple banded antigen  44.21 
 
 
423 aa  43.1  0.004  Ureaplasma urealyticum serovar 10 str. ATCC 33699  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3477  triple helix repeat-containing collagen  23.83 
 
 
936 aa  42.7  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00171179  n/a   
 
 
-
 
NC_008312  Tery_0570  filamentous haemagglutinin outer membrane protein  26.92 
 
 
3535 aa  42.4  0.007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_0572  filamentous haemagglutinin outer membrane protein  26.92 
 
 
3419 aa  42.4  0.007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11581  PPE family protein  41.56 
 
 
760 aa  42.4  0.007  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.912214 
 
 
-
 
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