34 homologs were found in PanDaTox collection
for query gene Rfer_0644 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0644  HAD family hydrolase  100 
 
 
283 aa  581  1.0000000000000001e-165  Rhodoferax ferrireducens T118  Bacteria  normal  0.123589  n/a   
 
 
-
 
NC_008782  Ajs_0616  HAD family hydrolase  67.97 
 
 
278 aa  351  8.999999999999999e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0595  HAD-superfamily hydrolase, subfamily IIB  67.26 
 
 
278 aa  346  2e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4133  HAD family hydrolase  61.65 
 
 
271 aa  340  2e-92  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4690  HAD-superfamily hydrolase, subfamily IIB  59.14 
 
 
275 aa  321  7e-87  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5932  HAD family hydrolase  57.68 
 
 
265 aa  312  3.9999999999999997e-84  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4067  HAD family hydrolase  63.44 
 
 
301 aa  309  2.9999999999999997e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3500  HAD family hydrolase  43.91 
 
 
267 aa  220  1.9999999999999999e-56  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.126173 
 
 
-
 
NC_003295  RSc1263  hypothetical protein  44.49 
 
 
295 aa  218  7.999999999999999e-56  Ralstonia solanacearum GMI1000  Bacteria  normal  0.151023  normal  0.478475 
 
 
-
 
NC_010682  Rpic_1091  HAD-superfamily hydrolase, subfamily IIB  43.54 
 
 
297 aa  218  1e-55  Ralstonia pickettii 12J  Bacteria  normal  0.024164  normal 
 
 
-
 
NC_012856  Rpic12D_1184  HAD-superfamily hydrolase, subfamily IIB  42.8 
 
 
297 aa  216  5e-55  Ralstonia pickettii 12D  Bacteria  normal  0.24726  normal 
 
 
-
 
NC_007973  Rmet_2056  HAD family hydrolase  41.49 
 
 
268 aa  214  9.999999999999999e-55  Cupriavidus metallidurans CH34  Bacteria  normal  0.413042  normal 
 
 
-
 
NC_007347  Reut_A2053  HAD family hydrolase  41.7 
 
 
287 aa  211  9e-54  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2700  HAD family hydrolase  39.58 
 
 
270 aa  203  3e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2219  HAD family hydrolase  34.86 
 
 
259 aa  161  1e-38  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0769  HAD family hydrolase  36.5 
 
 
257 aa  151  1e-35  Maricaulis maris MCS10  Bacteria  normal  0.0183682  normal  0.618821 
 
 
-
 
NC_012848  Rleg_5210  HAD-superfamily hydrolase, subfamily IIB  33.82 
 
 
281 aa  148  8e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.43756 
 
 
-
 
NC_013440  Hoch_5196  HAD-superfamily hydrolase, subfamily IIB  34.94 
 
 
278 aa  142  5e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0610  HAD family hydrolase  36.17 
 
 
282 aa  141  9.999999999999999e-33  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000152168 
 
 
-
 
NC_008544  Bcen2424_6271  HAD family hydrolase  31.56 
 
 
263 aa  134  1.9999999999999998e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.274563  normal  0.690052 
 
 
-
 
NC_008060  Bcen_1558  HAD family hydrolase  31.56 
 
 
263 aa  134  1.9999999999999998e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2097  HAD family hydrolase  32.25 
 
 
268 aa  132  5e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.978592  normal  0.811139 
 
 
-
 
NC_010512  Bcenmc03_6760  HAD family hydrolase  30.5 
 
 
263 aa  130  3e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06400  hypothetical protein  29.93 
 
 
274 aa  124  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_3874  HAD family hydrolase  30.6 
 
 
260 aa  103  3e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0597322 
 
 
-
 
NC_011884  Cyan7425_5151  HAD-superfamily hydrolase, subfamily IIB  30.15 
 
 
321 aa  93.6  3e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3590  HAD family hydrolase  29.81 
 
 
270 aa  93.2  4e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.684772  normal  0.0477257 
 
 
-
 
NC_011729  PCC7424_0088  HAD-superfamily hydrolase, subfamily IIB  28.63 
 
 
265 aa  87.8  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0509044 
 
 
-
 
NC_007604  Synpcc7942_0566  HAD family hydrolase  27.82 
 
 
251 aa  74.3  0.000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0688357 
 
 
-
 
NC_008726  Mvan_1423  HAD family hydrolase  39.73 
 
 
550 aa  44.3  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0177  HAD family hydrolase  37.84 
 
 
264 aa  44.7  0.002  Nocardioides sp. JS614  Bacteria  normal  0.0958993  n/a   
 
 
-
 
NC_009636  Smed_1945  HAD family hydrolase  35.53 
 
 
250 aa  42.7  0.006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.238634 
 
 
-
 
NC_009632  SaurJH1_1419  Cof-like hydrolase  21.05 
 
 
267 aa  42.4  0.009  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.00926207  n/a   
 
 
-
 
NC_009487  SaurJH9_1392  Cof-like hydrolase  21.05 
 
 
267 aa  42.4  0.009  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.000626489  n/a   
 
 
-
 
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