257 homologs were found in PanDaTox collection
for query gene Rfer_0062 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_3123  acyl-CoA dehydrogenase domain-containing protein  54.23 
 
 
568 aa  646    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000772503  n/a   
 
 
-
 
NC_009565  TBFG_10233  acyl-CoA dehydrogenase fadE4  55.71 
 
 
568 aa  673    Mycobacterium tuberculosis F11  Bacteria  normal  0.267065  normal 
 
 
-
 
NC_007908  Rfer_0062  acyl-CoA dehydrogenase-like  100 
 
 
567 aa  1188    Rhodoferax ferrireducens T118  Bacteria  normal  0.541142  n/a   
 
 
-
 
NC_013131  Caci_2118  acyl-CoA dehydrogenase domain protein  56.41 
 
 
577 aa  651    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3347  acyl-CoA dehydrogenase-like protein  62.59 
 
 
569 aa  755    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1045  acyl-CoA dehydrogenase domain protein  54.31 
 
 
587 aa  608  9.999999999999999e-173  Actinosynnema mirum DSM 43827  Bacteria  normal  0.972862  n/a   
 
 
-
 
NC_009338  Mflv_0398  acyl-CoA dehydrogenase domain-containing protein  52.01 
 
 
579 aa  600  1e-170  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.719718  normal  0.601672 
 
 
-
 
NC_008726  Mvan_0281  acyl-CoA dehydrogenase domain-containing protein  50.17 
 
 
590 aa  588  1e-167  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.619758  normal 
 
 
-
 
NC_013441  Gbro_2580  acyl-CoA dehydrogenase domain protein  50.87 
 
 
571 aa  574  1.0000000000000001e-162  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2682  acyl-CoA dehydrogenase domain protein  49.91 
 
 
572 aa  566  1e-160  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.638396  n/a   
 
 
-
 
NC_006349  BMAA1017  acyl-CoA dehydrogenase domain-containing protein  25.96 
 
 
586 aa  80.1  0.0000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0431122  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0276  acyl-CoA dehydrogenase domain-containing protein  25.96 
 
 
586 aa  80.1  0.0000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0294  acyl-CoA dehydrogenase domain-containing protein  25.96 
 
 
586 aa  80.1  0.0000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0434167  n/a   
 
 
-
 
NC_009075  BURPS668_A1799  Acyl-CoA dehydrogenases  25.96 
 
 
586 aa  80.1  0.0000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1713  acyl-CoA dehydrogenase domain-containing protein  24.68 
 
 
586 aa  79.7  0.0000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1301  acyl-CoA dehydrogenase domain-containing protein  25.96 
 
 
586 aa  80.1  0.0000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  24.41 
 
 
411 aa  79.3  0.0000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  24.45 
 
 
390 aa  78.6  0.0000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0407  acyl-CoA dehydrogenase domain-containing protein  24.86 
 
 
378 aa  74.3  0.000000000006  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  23.49 
 
 
402 aa  72.4  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  23.81 
 
 
402 aa  72  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  28.21 
 
 
381 aa  70.9  0.00000000006  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  23.2 
 
 
404 aa  70.1  0.0000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  25 
 
 
397 aa  70.1  0.0000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_2780  acyl-CoA dehydrogenase domain protein  23.77 
 
 
371 aa  68.6  0.0000000003  Sulfolobus solfataricus 98/2  Archaea  normal  0.0227253  n/a   
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  22.41 
 
 
399 aa  67.4  0.0000000007  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  22.63 
 
 
391 aa  65.1  0.000000004  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  22.63 
 
 
391 aa  65.1  0.000000004  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_013757  Gobs_1809  Glutaryl-CoA dehydrogenase  23.35 
 
 
395 aa  64.7  0.000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.141566  n/a   
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  24.03 
 
 
393 aa  63.9  0.000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  25.32 
 
 
381 aa  63.5  0.000000009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  22.26 
 
 
398 aa  63.5  0.00000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  22.88 
 
 
389 aa  63.2  0.00000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  23.1 
 
 
389 aa  62.8  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_011831  Cagg_0077  acyl-CoA dehydrogenase domain protein  22.48 
 
 
394 aa  62.4  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  21.77 
 
 
391 aa  62  0.00000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  23.15 
 
 
402 aa  61.6  0.00000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  24.16 
 
 
413 aa  61.6  0.00000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_014212  Mesil_1807  acyl-CoA dehydrogenase domain protein  24.49 
 
 
578 aa  60.8  0.00000006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.9558  normal  0.985453 
 
 
-
 
NC_009972  Haur_3970  acyl-CoA dehydrogenase domain-containing protein  25.21 
 
 
376 aa  60.5  0.00000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.493916  n/a   
 
 
-
 
NC_006368  lpp2177  hypothetical protein  21.03 
 
 
563 aa  60.5  0.00000008  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_3291  acyl-CoA dehydrogenase domain-containing protein  23.56 
 
 
555 aa  59.7  0.0000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.729038  normal 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  21.41 
 
 
401 aa  59.3  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  25.26 
 
 
381 aa  59.3  0.0000002  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013161  Cyan8802_0026  acyl-CoA dehydrogenase domain protein  22.34 
 
 
603 aa  59.3  0.0000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.0227659  normal 
 
 
-
 
NC_011988  Avi_5628  Acyl-CoA dehydrogenase  22.55 
 
 
603 aa  59.3  0.0000002  Agrobacterium vitis S4  Bacteria  normal  0.491683  n/a   
 
 
-
 
NC_011726  PCC8801_0028  acyl-CoA dehydrogenase domain protein  22.34 
 
 
603 aa  59.3  0.0000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2151  hypothetical protein  20.69 
 
 
563 aa  58.5  0.0000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_18370  acyl-CoA dehydrogenase  19.68 
 
 
583 aa  58.2  0.0000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2382  Glutaryl-CoA dehydrogenase  22.01 
 
 
407 aa  58.2  0.0000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  22.32 
 
 
388 aa  58.2  0.0000005  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_008025  Dgeo_1221  acyl-CoA dehydrogenase-like protein  21.21 
 
 
466 aa  57.4  0.0000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.395809  normal  0.664246 
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  22.56 
 
 
387 aa  56.6  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_013132  Cpin_3323  Glutaryl-CoA dehydrogenase  20.3 
 
 
454 aa  56.6  0.000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.0000794594 
 
 
-
 
NC_009253  Dred_0351  acyl-CoA dehydrogenase domain-containing protein  23.56 
 
 
586 aa  56.6  0.000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3043  acyl-CoA dehydrogenase domain protein  22.14 
 
 
402 aa  55.5  0.000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.942472  n/a   
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  21.94 
 
 
379 aa  55.8  0.000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06170  acetyl-CoA dehydrogenase  23.32 
 
 
602 aa  55.1  0.000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.214158  n/a   
 
 
-
 
NC_008009  Acid345_2471  butyryl-CoA dehydrogenase  23.96 
 
 
597 aa  54.7  0.000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2387  acyl-CoA dehydrogenase-like protein  24.06 
 
 
402 aa  54.7  0.000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.702715  n/a   
 
 
-
 
NC_008786  Veis_3260  acyl-CoA dehydrogenase domain-containing protein  22.98 
 
 
380 aa  55.1  0.000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.728931 
 
 
-
 
NC_013202  Hmuk_3108  acyl-CoA dehydrogenase domain protein  22.78 
 
 
380 aa  54.3  0.000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  25.12 
 
 
414 aa  54.3  0.000006  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_012029  Hlac_1205  acyl-CoA dehydrogenase domain protein  26.15 
 
 
381 aa  54.3  0.000006  Halorubrum lacusprofundi ATCC 49239  Archaea  unclonable  0.0000000395395  hitchhiker  0.00000719291 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  23.05 
 
 
379 aa  54.3  0.000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  22.02 
 
 
384 aa  54.3  0.000007  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  23.37 
 
 
391 aa  53.9  0.000008  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_009972  Haur_3470  acyl-CoA dehydrogenase domain-containing protein  18.75 
 
 
395 aa  53.9  0.000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.131363  n/a   
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  22.69 
 
 
383 aa  53.9  0.000008  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_19560  acyl-CoA dehydrogenase  20.38 
 
 
400 aa  53.5  0.000009  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_0539  acyl-CoA dehydrogenase domain-containing protein  20.76 
 
 
405 aa  53.1  0.00001  Thermoproteus neutrophilus V24Sta  Archaea  normal  hitchhiker  0.00283131 
 
 
-
 
NC_011886  Achl_0638  acyl-CoA dehydrogenase domain protein  21.88 
 
 
396 aa  53.5  0.00001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6905  Glutaryl-CoA dehydrogenase  19.92 
 
 
382 aa  53.5  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2789  acyl-CoA dehydrogenase domain protein  23.16 
 
 
385 aa  53.1  0.00001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.183499 
 
 
-
 
NC_013159  Svir_18380  acyl-CoA dehydrogenase  24.22 
 
 
549 aa  53.5  0.00001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.355555  normal 
 
 
-
 
NC_013205  Aaci_1596  acyl-CoA dehydrogenase domain protein  22.61 
 
 
593 aa  53.1  0.00001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0612446  n/a   
 
 
-
 
NC_013202  Hmuk_2909  acyl-CoA dehydrogenase domain protein  24.62 
 
 
389 aa  52.4  0.00002  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.214496  normal 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  21.67 
 
 
383 aa  52.8  0.00002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1141  acyl-CoA dehydrogenase domain protein  22.92 
 
 
387 aa  52.4  0.00002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_011898  Ccel_0988  acyl-CoA dehydrogenase domain protein  21.99 
 
 
378 aa  52  0.00003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  24.56 
 
 
385 aa  51.6  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  22.56 
 
 
379 aa  52  0.00003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1814  acyl-CoA dehydrogenase-like protein  21.79 
 
 
391 aa  52  0.00003  Cupriavidus metallidurans CH34  Bacteria  normal  0.0270367  normal  0.034848 
 
 
-
 
NC_014230  CA2559_01490  Acyl-CoA dehydrogenase  18.37 
 
 
453 aa  51.6  0.00003  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2935  acyl-CoA dehydrogenase domain protein  24.14 
 
 
594 aa  52  0.00003  Geobacillus sp. WCH70  Bacteria  normal  0.631694  n/a   
 
 
-
 
NC_009073  Pcal_1308  acyl-CoA dehydrogenase domain-containing protein  22.66 
 
 
407 aa  52  0.00003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0345991 
 
 
-
 
NC_013411  GYMC61_3086  acyl-CoA dehydrogenase domain protein  23.65 
 
 
594 aa  52  0.00003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2795  acyl-CoA dehydrogenase domain protein  23.53 
 
 
585 aa  51.6  0.00004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.596008  n/a   
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  21.99 
 
 
398 aa  51.2  0.00004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009664  Krad_3505  acyl-CoA dehydrogenase domain protein  19.47 
 
 
393 aa  51.6  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.147907  normal 
 
 
-
 
NC_013730  Slin_5112  acyl-CoA dehydrogenase domain protein  22.54 
 
 
599 aa  51.6  0.00004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  24.56 
 
 
385 aa  51.6  0.00004  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3722  acyl-CoA dehydrogenase domain protein  22.61 
 
 
596 aa  51.2  0.00004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  20.62 
 
 
392 aa  51.2  0.00005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  23.08 
 
 
381 aa  51.2  0.00005  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_013743  Htur_0915  acyl-CoA dehydrogenase domain protein  22.45 
 
 
383 aa  51.2  0.00005  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  20.48 
 
 
393 aa  50.8  0.00006  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_013757  Gobs_1474  acyl-CoA dehydrogenase domain protein  22.48 
 
 
384 aa  50.8  0.00006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009073  Pcal_0167  acyl-CoA dehydrogenase domain-containing protein  21.74 
 
 
376 aa  50.8  0.00006  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009523  RoseRS_0319  acyl-CoA dehydrogenase domain-containing protein  21.7 
 
 
383 aa  50.8  0.00007  Roseiflexus sp. RS-1  Bacteria  normal  0.339666  normal  0.0442463 
 
 
-
 
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