111 homologs were found in PanDaTox collection
for query gene Rcas_4100 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
154 aa  313  7e-85  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  84.31 
 
 
160 aa  268  1e-71  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  71.63 
 
 
155 aa  217  5e-56  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  61.7 
 
 
154 aa  190  8e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4099  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.22 
 
 
147 aa  106  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256347  normal  0.1124 
 
 
-
 
NC_009972  Haur_1623  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.58 
 
 
154 aa  101  4e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.73 
 
 
147 aa  94.7  4e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.94 
 
 
139 aa  73.2  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.54 
 
 
144 aa  72  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.59 
 
 
144 aa  72  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.56 
 
 
142 aa  68.9  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_011831  Cagg_3035  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.84 
 
 
142 aa  67.4  0.00000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.0000026791 
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  31.16 
 
 
162 aa  64.7  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_2515  putative anti-sigma regulatory factor, serine/threonine protein kinase  35 
 
 
148 aa  63.9  0.0000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.538602  normal  0.204677 
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  30.33 
 
 
160 aa  62.4  0.000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  30.33 
 
 
160 aa  62.4  0.000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  30.33 
 
 
160 aa  62.4  0.000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  30.33 
 
 
160 aa  62.4  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  28.69 
 
 
160 aa  62  0.000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  30.82 
 
 
159 aa  61.6  0.000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  30.33 
 
 
160 aa  61.6  0.000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  30.33 
 
 
160 aa  61.6  0.000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  30.33 
 
 
160 aa  61.2  0.000000005  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.58 
 
 
139 aa  60.8  0.000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  32.12 
 
 
141 aa  60.5  0.000000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  29.27 
 
 
160 aa  60.5  0.000000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2555  anti-sigma-factor antagonist  33.59 
 
 
249 aa  60.1  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1225  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.84 
 
 
148 aa  59.3  0.00000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00856956  n/a   
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  29.51 
 
 
160 aa  58.9  0.00000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2065  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.28 
 
 
143 aa  59.3  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  27.03 
 
 
159 aa  58.2  0.00000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  27.03 
 
 
159 aa  58.2  0.00000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
151 aa  57.4  0.00000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  28.17 
 
 
143 aa  57  0.00000008  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  30.88 
 
 
148 aa  56.6  0.0000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2838  putative anti-sigma regulatory factor serine/threonine protein kinase  28.68 
 
 
147 aa  57  0.0000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.1 
 
 
151 aa  55.5  0.0000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27.7 
 
 
144 aa  55.1  0.0000004  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_007413  Ava_0663  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  25.93 
 
 
142 aa  53.9  0.0000008  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00575622  normal  0.0631773 
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
147 aa  53.9  0.0000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1924  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.15 
 
 
492 aa  53.9  0.0000009  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.184744 
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.91 
 
 
146 aa  53.1  0.000001  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.2 
 
 
134 aa  53.1  0.000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_011898  Ccel_2285  anti-sigma F factor  28.47 
 
 
141 aa  53.5  0.000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  28.47 
 
 
153 aa  53.1  0.000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  30.5 
 
 
149 aa  52.4  0.000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  24.03 
 
 
148 aa  52.4  0.000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  29.63 
 
 
143 aa  52.4  0.000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_008639  Cpha266_1826  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.08 
 
 
147 aa  52  0.000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1662  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.28 
 
 
146 aa  51.2  0.000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.503488  normal  0.167313 
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.86 
 
 
143 aa  51.2  0.000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.01 
 
 
141 aa  50.8  0.000007  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  28.46 
 
 
145 aa  50.8  0.000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2161  anti-sigma-factor antagonist  30.61 
 
 
250 aa  50.4  0.000009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0477  anti-sigma F factor  28.89 
 
 
157 aa  50.1  0.00001  Clostridium phytofermentans ISDg  Bacteria  normal  0.899963  n/a   
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  31.3 
 
 
142 aa  48.9  0.00002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  26.67 
 
 
133 aa  49.3  0.00002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_008346  Swol_1997  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.13 
 
 
495 aa  49.3  0.00002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3724  ATPase domain-containing protein  32.74 
 
 
163 aa  49.3  0.00002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.65 
 
 
141 aa  49.3  0.00002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.65 
 
 
141 aa  49.3  0.00002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  21.62 
 
 
140 aa  47.8  0.00005  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
NC_009921  Franean1_6671  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.29 
 
 
357 aa  47.8  0.00006  Frankia sp. EAN1pec  Bacteria  normal  0.314942  normal 
 
 
-
 
NC_008554  Sfum_4032  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.75 
 
 
155 aa  47.4  0.00007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1422  anti-sigma-factor antagonist  27.41 
 
 
250 aa  47.4  0.00007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2021  anti-sigma F factor  29.9 
 
 
140 aa  47.4  0.00008  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  23.13 
 
 
146 aa  47.4  0.00008  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_009767  Rcas_1195  anti-sigma-factor antagonist  32.99 
 
 
269 aa  47  0.00009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.123525  normal 
 
 
-
 
NC_007498  Pcar_1875  anti-sigma regulatory factor  29.1 
 
 
139 aa  46.6  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000201046  n/a   
 
 
-
 
NC_008261  CPF_2306  anti-sigma F factor  29.9 
 
 
140 aa  46.6  0.0001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4818  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.26 
 
 
140 aa  47  0.0001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  28.79 
 
 
149 aa  46.6  0.0001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1104  anti-sigma F factor  24.22 
 
 
148 aa  47  0.0001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_009953  Sare_4105  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.96 
 
 
151 aa  47  0.0001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0408449 
 
 
-
 
NC_010717  PXO_03913  hypothetical protein  29.03 
 
 
143 aa  46.6  0.0001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.32 
 
 
143 aa  47  0.0001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.13 
 
 
138 aa  45.4  0.0002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_011884  Cyan7425_0700  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.27 
 
 
136 aa  45.8  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1112  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.35 
 
 
160 aa  45.4  0.0003  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2974  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
151 aa  45.1  0.0003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0401  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.22 
 
 
144 aa  45.1  0.0004  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00256167  n/a   
 
 
-
 
NC_013411  GYMC61_0373  anti-sigma F factor  25.53 
 
 
146 aa  45.1  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014211  Ndas_5413  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.31 
 
 
159 aa  44.3  0.0006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1681  anti-sigma F factor  29.79 
 
 
154 aa  43.9  0.0008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1200  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27.84 
 
 
145 aa  43.5  0.001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2057  integral membrane sensor signal transduction histidine kinase  32.26 
 
 
504 aa  43.5  0.001  Roseiflexus sp. RS-1  Bacteria  normal  0.799805  normal  0.0394761 
 
 
-
 
NC_013203  Apar_0915  anti-sigma-factor antagonist  31.62 
 
 
243 aa  43.1  0.001  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.583996 
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  30.94 
 
 
142 aa  43.5  0.001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1438  putative anti-sigma regulatory factor  30.19 
 
 
164 aa  42.7  0.002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0533473  normal  0.759887 
 
 
-
 
NC_013510  Tcur_3862  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.11 
 
 
316 aa  43.1  0.002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1839  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.56 
 
 
140 aa  42.4  0.002  Chlorobium limicola DSM 245  Bacteria  normal  0.481374  n/a   
 
 
-
 
NC_011060  Ppha_1014  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.91 
 
 
147 aa  42.7  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000121242  n/a   
 
 
-
 
NC_013757  Gobs_2284  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.82 
 
 
323 aa  42  0.003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0993778  n/a   
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  25.69 
 
 
146 aa  42  0.003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0851  PAS/PAC sensor signal transduction histidine kinase  30.56 
 
 
469 aa  42  0.003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0355773  normal 
 
 
-
 
NC_002977  MCA1666  sensor histidine kinase  30.59 
 
 
142 aa  41.6  0.004  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4415  putative serine/threonine kinase anti-sigma factor  31.36 
 
 
175 aa  41.6  0.004  Frankia sp. CcI3  Bacteria  decreased coverage  0.00721125  normal 
 
 
-
 
NC_013203  Apar_1348  histidine kinase  35.23 
 
 
501 aa  41.6  0.004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.515384 
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.91 
 
 
180 aa  41.6  0.005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_009012  Cthe_2899  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.12 
 
 
130 aa  41.2  0.006  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0642397  n/a   
 
 
-
 
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