More than 300 homologs were found in PanDaTox collection
for query gene Rcas_3727 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3727  short-chain dehydrogenase/reductase SDR  100 
 
 
258 aa  513  1.0000000000000001e-145  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.358068  hitchhiker  0.00171141 
 
 
-
 
NC_009523  RoseRS_3239  short-chain dehydrogenase/reductase SDR  87.6 
 
 
258 aa  439  9.999999999999999e-123  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.703839 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  38.08 
 
 
258 aa  169  3e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  43.14 
 
 
272 aa  169  4e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  37.11 
 
 
262 aa  157  2e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  42.63 
 
 
264 aa  156  3e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  41.67 
 
 
264 aa  155  7e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  41.15 
 
 
264 aa  154  1e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  41.15 
 
 
264 aa  154  1e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  41.15 
 
 
264 aa  154  1e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  41.15 
 
 
264 aa  154  1e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  41.67 
 
 
264 aa  153  2e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  41.67 
 
 
264 aa  152  5e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  41.67 
 
 
264 aa  152  5e-36  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  42.31 
 
 
272 aa  152  5e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  41.98 
 
 
260 aa  152  5.9999999999999996e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  41.67 
 
 
264 aa  152  7e-36  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  41.15 
 
 
264 aa  151  8.999999999999999e-36  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  34.52 
 
 
264 aa  149  3e-35  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009767  Rcas_2188  thiamine pyrophosphate protein central region  44 
 
 
847 aa  142  6e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.941679 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  38.95 
 
 
261 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_3927  short-chain dehydrogenase/reductase SDR  39.46 
 
 
272 aa  139  3.9999999999999997e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.743458 
 
 
-
 
NC_007802  Jann_1321  short-chain dehydrogenase/reductase SDR  38.61 
 
 
282 aa  139  4.999999999999999e-32  Jannaschia sp. CCS1  Bacteria  normal  0.889604  normal 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  34.07 
 
 
339 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  36.92 
 
 
269 aa  137  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  39.53 
 
 
332 aa  137  2e-31  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  37.34 
 
 
249 aa  137  2e-31  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  39 
 
 
330 aa  134  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  36.21 
 
 
281 aa  134  1.9999999999999998e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  38.61 
 
 
330 aa  134  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  41.41 
 
 
237 aa  134  1.9999999999999998e-30  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  38.66 
 
 
246 aa  131  7.999999999999999e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_010725  Mpop_1226  short-chain dehydrogenase/reductase SDR  39.9 
 
 
247 aa  132  7.999999999999999e-30  Methylobacterium populi BJ001  Bacteria  normal  0.340445  normal  0.365193 
 
 
-
 
NC_007952  Bxe_B2139  short chain dehydrogenase  41.49 
 
 
284 aa  131  9e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.980351 
 
 
-
 
NC_010581  Bind_1468  short-chain dehydrogenase/reductase SDR  43.41 
 
 
277 aa  130  1.0000000000000001e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.875416  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  33.86 
 
 
269 aa  131  1.0000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  41.97 
 
 
262 aa  130  1.0000000000000001e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_3333  short chain dehydrogenase  36.51 
 
 
280 aa  131  1.0000000000000001e-29  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5059  short-chain dehydrogenase/reductase SDR  43.59 
 
 
266 aa  130  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  37.7 
 
 
280 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_011060  Ppha_1610  short-chain dehydrogenase/reductase SDR  36.52 
 
 
232 aa  130  3e-29  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  39.8 
 
 
262 aa  129  3e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  36.65 
 
 
266 aa  129  3e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3292  short-chain dehydrogenase/reductase SDR  33.19 
 
 
268 aa  129  4.0000000000000003e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  0.392753  n/a   
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  40.77 
 
 
269 aa  129  5.0000000000000004e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  42.19 
 
 
317 aa  129  5.0000000000000004e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  38.62 
 
 
278 aa  129  5.0000000000000004e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  40.72 
 
 
252 aa  128  1.0000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1073  thiamine pyrophosphate enzyme, central region  41.14 
 
 
847 aa  127  1.0000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0796  short-chain dehydrogenase/reductase SDR  35.81 
 
 
281 aa  128  1.0000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.35999 
 
 
-
 
NC_012880  Dd703_2717  short chain dehydrogenase  39.46 
 
 
276 aa  127  1.0000000000000001e-28  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  36.92 
 
 
327 aa  127  1.0000000000000001e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  35.11 
 
 
236 aa  127  2.0000000000000002e-28  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_008528  OEOE_0757  Short-chain dehydrogenase of various substrate specificities  32.11 
 
 
282 aa  127  2.0000000000000002e-28  Oenococcus oeni PSU-1  Bacteria  normal  0.0227485  n/a   
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  30.9 
 
 
230 aa  127  3e-28  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0971  Short-chain alcohol dehydrogenase  38.1 
 
 
287 aa  127  3e-28  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2942  short-chain dehydrogenase/reductase SDR  35.68 
 
 
272 aa  126  4.0000000000000003e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4560  short chain dehydrogenase  39.58 
 
 
280 aa  126  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0967831  normal 
 
 
-
 
NC_008726  Mvan_0982  short chain dehydrogenase  39.25 
 
 
285 aa  126  4.0000000000000003e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4296  short chain dehydrogenase  40.1 
 
 
280 aa  125  6e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_2810  short-chain dehydrogenase/reductase SDR  40.96 
 
 
284 aa  125  6e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.329601  normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  37.17 
 
 
267 aa  125  6e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_003296  RS03890  short chain dehydrogenase  39.46 
 
 
276 aa  125  8.000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.606349 
 
 
-
 
NC_014165  Tbis_1608  short-chain dehydrogenase/reductase SDR  41.67 
 
 
250 aa  125  9e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  33.84 
 
 
267 aa  124  1e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  33.84 
 
 
267 aa  124  1e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  33.84 
 
 
267 aa  124  1e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  33.84 
 
 
267 aa  124  1e-27  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  35.29 
 
 
287 aa  124  2e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
NC_010505  Mrad2831_5502  short-chain dehydrogenase/reductase SDR  37.95 
 
 
282 aa  124  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_4325  3-oxoacyl-(acyl-carrier-protein) reductase  36.1 
 
 
250 aa  123  3e-27  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00118279  normal  0.0328571 
 
 
-
 
NC_011726  PCC8801_4265  3-oxoacyl-(acyl-carrier-protein) reductase  36.1 
 
 
250 aa  123  3e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_3863  3-ketoacyl-(acyl-carrier-protein) reductase  39.06 
 
 
250 aa  123  3e-27  Nocardioides sp. JS614  Bacteria  normal  0.385562  n/a   
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  35.77 
 
 
299 aa  123  3e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_008146  Mmcs_0762  short chain dehydrogenase  39.56 
 
 
274 aa  123  4e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0703  Short-chain alcohol dehydrogenase  35.68 
 
 
284 aa  122  4e-27  Oenococcus oeni PSU-1  Bacteria  normal  0.465762  n/a   
 
 
-
 
NC_008705  Mkms_0776  short chain dehydrogenase  39.56 
 
 
274 aa  123  4e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0756  short chain dehydrogenase  39.56 
 
 
274 aa  122  4e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.624051 
 
 
-
 
NC_010623  Bphy_3982  short-chain dehydrogenase/reductase SDR  38.38 
 
 
287 aa  122  5e-27  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000201148  normal 
 
 
-
 
NC_013739  Cwoe_2667  short-chain dehydrogenase/reductase SDR  36.12 
 
 
230 aa  122  5e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.224966  normal  0.349225 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  34.22 
 
 
267 aa  122  5e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0037  short chain dehydrogenase  36.17 
 
 
283 aa  122  7e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.40951  normal 
 
 
-
 
NC_010087  Bmul_6101  short-chain dehydrogenase/reductase SDR  34.84 
 
 
285 aa  122  8e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  38.34 
 
 
248 aa  121  9e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_009636  Smed_1211  short-chain dehydrogenase/reductase SDR  39.78 
 
 
274 aa  121  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.12295  normal  0.414584 
 
 
-
 
NC_010676  Bphyt_7087  short chain dehydrogenase  35.68 
 
 
284 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35.14 
 
 
238 aa  121  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007952  Bxe_B0206  short chain dehydrogenase  36.15 
 
 
284 aa  120  9.999999999999999e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  36.65 
 
 
279 aa  121  9.999999999999999e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_009767  Rcas_1156  short-chain dehydrogenase/reductase SDR  41.13 
 
 
269 aa  120  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  30.48 
 
 
347 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  40.27 
 
 
241 aa  121  9.999999999999999e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  36.65 
 
 
233 aa  121  9.999999999999999e-27  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_011729  PCC7424_2848  3-ketoacyl-(acyl-carrier-protein) reductase  37.7 
 
 
246 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  34.8 
 
 
285 aa  120  1.9999999999999998e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  32.47 
 
 
278 aa  120  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  34.83 
 
 
267 aa  120  1.9999999999999998e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009621  Smed_5220  short-chain dehydrogenase/reductase SDR  38.74 
 
 
279 aa  120  1.9999999999999998e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1178  Short-chain dehydrogenase/reductase SDR  37.88 
 
 
286 aa  120  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  normal  0.0954699 
 
 
-
 
NC_008528  OEOE_1560  Short-chain dehydrogenase of various substrate specificities  38.46 
 
 
272 aa  120  1.9999999999999998e-26  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
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