More than 300 homologs were found in PanDaTox collection
for query gene Rcas_3359 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  100 
 
 		 386 aa  796    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal  1 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  95.08 
 
 		 386 aa  759    Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal  1 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  62.9 
 
 		 374 aa  469  1.0000000000000001e-131  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  61.6 
 
 		 376 aa  468  9.999999999999999e-131  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  61.29 
 
 		 373 aa  452  1.0000000000000001e-126  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  60.75 
 
 		 373 aa  451  1e-125  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  60.75 
 
 		 373 aa  450  1e-125  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  56.3 
 
 		 374 aa  435  1e-121  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  56.99 
 
 		 374 aa  434  1e-120  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  56.95 
 
 		 383 aa  429  1e-119  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  56.99 
 
 		 372 aa  429  1e-119  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.352304 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  55.65 
 
 		 373 aa  422  1e-117  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  55.94 
 
 		 384 aa  422  1e-117  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.162276 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  55.38 
 
 		 374 aa  418  1e-116  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  57.75 
 
 		 373 aa  421  1e-116  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  54.4 
 
 		 373 aa  420  1e-116  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  55.38 
 
 		 374 aa  417  9.999999999999999e-116  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  55.56 
 
 		 389 aa  416  9.999999999999999e-116  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  56.15 
 
 		 373 aa  417  9.999999999999999e-116  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  55.41 
 
 		 378 aa  412  1e-114  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  57.07 
 
 		 391 aa  410  1e-113  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.618886 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  53.33 
 
 		 376 aa  410  1e-113  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  54.2 
 
 		 377 aa  409  1e-113  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  54.84 
 
 		 379 aa  405  1.0000000000000001e-112  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  54.96 
 
 		 379 aa  405  1.0000000000000001e-112  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  50.67 
 
 		 415 aa  405  1.0000000000000001e-112  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.210414 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  56.27 
 
 		 385 aa  405  1.0000000000000001e-112  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  52.33 
 
 		 397 aa  405  1.0000000000000001e-112  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  55.08 
 
 		 391 aa  406  1.0000000000000001e-112  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal  1 
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  53.33 
 
 		 377 aa  404  1e-111  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.110228 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  53.89 
 
 		 385 aa  403  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal  1 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  53.81 
 
 		 369 aa  403  1e-111  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  58.16 
 
 		 377 aa  402  1e-111  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  51.56 
 
 		 393 aa  402  1e-111  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0283036 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  53.24 
 
 		 359 aa  398  9.999999999999999e-111  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  51.18 
 
 		 371 aa  399  9.999999999999999e-111  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  56.03 
 
 		 361 aa  400  9.999999999999999e-111  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  53.85 
 
 		 380 aa  401  9.999999999999999e-111  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  51.78 
 
 		 401 aa  400  9.999999999999999e-111  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  53.85 
 
 		 380 aa  401  9.999999999999999e-111  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  52.13 
 
 		 378 aa  399  9.999999999999999e-111  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  55.85 
 
 		 388 aa  395  1e-109  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.924948 
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  53.85 
 
 		 378 aa  398  1e-109  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3947  carbamoyl-phosphate synthase, small subunit  57.58 
 
 		 408 aa  397  1e-109  Haliangium ochraceum DSM 14365  Bacteria  normal  0.201135  hitchhiker  0.00383855 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  52.27 
 
 		 391 aa  395  1e-109  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012892  B21_00035  hypothetical protein  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  52.27 
 
 		 382 aa  395  1e-109  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  52.27 
 
 		 382 aa  395  1e-109  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  51.83 
 
 		 369 aa  393  1e-108  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  52.12 
 
 		 382 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  51.85 
 
 		 382 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  52.27 
 
 		 382 aa  393  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.314254 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  51.85 
 
 		 391 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  53.48 
 
 		 366 aa  394  1e-108  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  51.44 
 
 		 369 aa  393  1e-108  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  52.12 
 
 		 382 aa  392  1e-108  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  57.55 
 
 		 388 aa  390  1e-107  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  50.13 
 
 		 440 aa  390  1e-107  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  51.54 
 
 		 394 aa  389  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  52.37 
 
 		 381 aa  390  1e-107  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  53.03 
 
 		 382 aa  388  1e-107  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  51.59 
 
 		 382 aa  389  1e-107  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  54.4 
 
 		 380 aa  390  1e-107  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  51.85 
 
 		 382 aa  389  1e-107  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  56.2 
 
 		 372 aa  387  1e-106  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.0370749 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  51.07 
 
 		 378 aa  387  1e-106  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  50.26 
 
 		 383 aa  387  1e-106  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  51.6 
 
 		 396 aa  387  1e-106  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal  1 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  51.58 
 
 		 381 aa  385  1e-106  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_012912  Dd1591_0554  carbamoyl-phosphate synthase, small subunit  52.37 
 
 		 381 aa  387  1e-106  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  52.25 
 
 		 379 aa  385  1e-106  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  51.31 
 
 		 384 aa  387  1e-106  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_013422  Hneap_1563  carbamoyl-phosphate synthase, small subunit  52.83 
 
 		 377 aa  387  1e-106  Halothiobacillus neapolitanus c2  Bacteria  normal  0.878317  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  48.67 
 
 		 376 aa  382  1e-105  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  52.52 
 
 		 391 aa  381  1e-105  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.67 
 
 		 381 aa  384  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  51.19 
 
 		 382 aa  383  1e-105  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  52.25 
 
 		 380 aa  384  1e-105  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  52.67 
 
 		 359 aa  382  1e-105  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  50.67 
 
 		 381 aa  383  1e-105  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  50.26 
 
 		 398 aa  382  1e-105  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.287672 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  50.4 
 
 		 381 aa  382  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  50.8 
 
 		 378 aa  383  1e-105  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal  1 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  49.87 
 
 		 387 aa  383  1e-105  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal  1 
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  52.36 
 
 		 390 aa  382  1e-105  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  52.12 
 
 		 382 aa  382  1e-105  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.67 
 
 		 381 aa  384  1e-105  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  52.62 
 
 		 388 aa  382  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.259128 
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  51.99 
 
 		 378 aa  382  1e-105  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  53.51 
 
 		 359 aa  382  1e-105  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  52.79 
 
 		 391 aa  382  1e-105  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  54.81 
 
 		 395 aa  382  1e-105  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  51.19 
 
 		 381 aa  384  1e-105  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal  1 
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  52.52 
 
 		 391 aa  382  1e-105  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  52.36 
 
 		 390 aa  382  1e-105  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.4 
 
 		 381 aa  382  1e-105  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
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