37 homologs were found in PanDaTox collection
for query gene RSc1263 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003295  RSc1263  hypothetical protein  100 
 
 		 295 aa  587  1e-167  Ralstonia solanacearum GMI1000  Bacteria  normal  0.151023  normal  0.478475 
 
 
-
 
NC_012856  Rpic12D_1184  HAD-superfamily hydrolase, subfamily IIB  83.73 
 
 		 297 aa  504  9.999999999999999e-143  Ralstonia pickettii 12D  Bacteria  normal  0.24726  normal  1 
 
 
-
 
NC_010682  Rpic_1091  HAD-superfamily hydrolase, subfamily IIB  83.45 
 
 		 297 aa  506  9.999999999999999e-143  Ralstonia pickettii 12J  Bacteria  normal  0.024164  normal  1 
 
 
-
 
NC_007973  Rmet_2056  HAD family hydrolase  61.98 
 
 		 268 aa  320  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  0.413042  normal  1 
 
 
-
 
NC_007347  Reut_A2053  HAD family hydrolase  61.69 
 
 		 287 aa  319  3.9999999999999996e-86  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_3500  HAD family hydrolase  49.41 
 
 		 267 aa  250  2e-65  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.126173 
 
 
-
 
NC_009636  Smed_2700  HAD family hydrolase  47.58 
 
 		 270 aa  226  3e-58  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5932  HAD family hydrolase  45.56 
 
 		 265 aa  222  4.9999999999999996e-57  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4690  HAD-superfamily hydrolase, subfamily IIB  45.63 
 
 		 275 aa  211  2e-53  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4133  HAD family hydrolase  45.88 
 
 		 271 aa  210  2e-53  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_0644  HAD family hydrolase  44.49 
 
 		 283 aa  201  1.9999999999999998e-50  Rhodoferax ferrireducens T118  Bacteria  normal  0.123589  n/a   
 
 
-
 
NC_008782  Ajs_0616  HAD family hydrolase  45.77 
 
 		 278 aa  198  9e-50  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0595  HAD-superfamily hydrolase, subfamily IIB  45 
 
 		 278 aa  195  9e-49  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4067  HAD family hydrolase  45.45 
 
 		 301 aa  186  4e-46  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_2097  HAD family hydrolase  37.41 
 
 		 268 aa  178  9e-44  Psychromonas ingrahamii 37  Bacteria  normal  0.978592  normal  0.811139 
 
 
-
 
NC_010581  Bind_2219  HAD family hydrolase  39.27 
 
 		 259 aa  177  2e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009784  VIBHAR_06400  hypothetical protein  37.17 
 
 		 274 aa  174  9.999999999999999e-43  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008347  Mmar10_0769  HAD family hydrolase  37.07 
 
 		 257 aa  163  3e-39  Maricaulis maris MCS10  Bacteria  normal  0.0183682  normal  0.618821 
 
 
-
 
NC_012848  Rleg_5210  HAD-superfamily hydrolase, subfamily IIB  40.23 
 
 		 281 aa  163  3e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.43756 
 
 
-
 
NC_010512  Bcenmc03_6760  HAD family hydrolase  38.38 
 
 		 263 aa  160  2e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0610  HAD family hydrolase  36.88 
 
 		 282 aa  160  3e-38  Marinomonas sp. MWYL1  Bacteria  normal  1  hitchhiker  0.00000152168 
 
 
-
 
NC_008544  Bcen2424_6271  HAD family hydrolase  38.72 
 
 		 263 aa  156  4e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  0.274563  normal  0.690052 
 
 
-
 
NC_008060  Bcen_1558  HAD family hydrolase  38.72 
 
 		 263 aa  156  4e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_5196  HAD-superfamily hydrolase, subfamily IIB  36.5 
 
 		 278 aa  134  1.9999999999999998e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_3590  HAD family hydrolase  31.47 
 
 		 270 aa  105  1e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  0.684772  normal  0.0477257 
 
 
-
 
NC_008312  Tery_3874  HAD family hydrolase  29.02 
 
 		 260 aa  104  2e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0597322 
 
 
-
 
NC_011729  PCC7424_0088  HAD-superfamily hydrolase, subfamily IIB  29.51 
 
 		 265 aa  98.6  1e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0509044 
 
 
-
 
NC_007604  Synpcc7942_0566  HAD family hydrolase  30.94 
 
 		 251 aa  94.7  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.0688357 
 
 
-
 
NC_011884  Cyan7425_5151  HAD-superfamily hydrolase, subfamily IIB  29.34 
 
 		 321 aa  85.1  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_0700  putative HAD superfamily hydrolase  36.36 
 
 		 273 aa  48.9  0.00009  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_1519  HAD family hydrolase  21.9 
 
 		 277 aa  48.9  0.0001  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1309  HAD family hydrolase  20.36 
 
 		 277 aa  48.1  0.0002  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_00960  Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily/HAD-superfamily hydrolase, subfamily IIB  36.94 
 
 		 282 aa  47.8  0.0002  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_2939  SPP-like hydrolase  26.72 
 
 		 232 aa  43.9  0.003  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.0000389482  normal  0.976262 
 
 
-
 
NC_006055  Mfl481  HAD-superfamily cof-like hydrolase  21.57 
 
 		 282 aa  43.5  0.005  Mesoplasma florum L1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009712  Mboo_2100  SPP-like hydrolase  25.23 
 
 		 232 aa  43.1  0.006  Candidatus Methanoregula boonei 6A8  Archaea  normal  1  normal  1 
 
 
-
 
NC_008010  Dgeo_2618  HAD family hydrolase  27.54 
 
 		 261 aa  42.4  0.01  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
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