More than 300 homologs were found in PanDaTox collection
for query gene RSP_1953 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  100 
 
 		 246 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  99.19 
 
 		 246 aa  488  1e-137  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  67.9 
 
 		 243 aa  330  2e-89  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.173486 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  68.35 
 
 		 243 aa  322  5e-87  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  41.26 
 
 		 252 aa  174  9e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  37.27 
 
 		 252 aa  157  1e-37  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  37.27 
 
 		 252 aa  157  1e-37  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  36.21 
 
 		 246 aa  157  2e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  37.99 
 
 		 384 aa  153  2e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  41.41 
 
 		 253 aa  153  2e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  36.21 
 
 		 246 aa  152  5e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  38.26 
 
 		 255 aa  149  4e-35  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  37.55 
 
 		 384 aa  149  5e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  37.34 
 
 		 235 aa  148  9e-35  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  37.02 
 
 		 244 aa  147  1.0000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  36.91 
 
 		 376 aa  147  1.0000000000000001e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal  1 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  37.02 
 
 		 244 aa  148  1.0000000000000001e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal  1 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  37.04 
 
 		 244 aa  145  5e-34  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal  1 
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  37.72 
 
 		 253 aa  145  7.0000000000000006e-34  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  34.84 
 
 		 276 aa  145  8.000000000000001e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  35.06 
 
 		 248 aa  144  1e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  34.29 
 
 		 250 aa  141  7e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  37.07 
 
 		 243 aa  141  8e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.000118444 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  37.83 
 
 		 259 aa  140  9.999999999999999e-33  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  39.3 
 
 		 247 aa  141  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  34.19 
 
 		 249 aa  140  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  38.36 
 
 		 259 aa  137  1e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.161686 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  32.89 
 
 		 263 aa  137  1e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  38.36 
 
 		 259 aa  137  1e-31  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.996332 
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  35.37 
 
 		 247 aa  137  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  37.25 
 
 		 240 aa  137  2e-31  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  37.83 
 
 		 254 aa  136  3.0000000000000003e-31  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  34.53 
 
 		 256 aa  136  3.0000000000000003e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.858211 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  35.71 
 
 		 249 aa  136  4e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  34.93 
 
 		 247 aa  135  7.000000000000001e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  36.32 
 
 		 225 aa  133  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0893417 
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  33.48 
 
 		 262 aa  132  5e-30  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.586423 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  37.34 
 
 		 250 aa  131  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  1 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  34.62 
 
 		 249 aa  130  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.371562 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  34.48 
 
 		 249 aa  130  3e-29  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  34.06 
 
 		 244 aa  129  4.0000000000000003e-29  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  36.63 
 
 		 243 aa  129  4.0000000000000003e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  37.5 
 
 		 268 aa  129  5.0000000000000004e-29  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  30.77 
 
 		 241 aa  128  9.000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  31.3 
 
 		 250 aa  126  3e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  32.3 
 
 		 243 aa  126  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  31.3 
 
 		 250 aa  125  7e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  32.47 
 
 		 259 aa  124  1e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.00010652 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  33.77 
 
 		 317 aa  123  3e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal  1 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  33.33 
 
 		 257 aa  122  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00106309 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  33.77 
 
 		 299 aa  122  4e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  35.17 
 
 		 255 aa  122  4e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  34.88 
 
 		 254 aa  122  5e-27  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  32.31 
 
 		 255 aa  122  7e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  33.33 
 
 		 257 aa  121  8e-27  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  30.7 
 
 		 245 aa  121  9.999999999999999e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  30.3 
 
 		 246 aa  121  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal  1 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  32.47 
 
 		 298 aa  120  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal  1 
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  30.17 
 
 		 239 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal  1 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  33.62 
 
 		 245 aa  119  3e-26  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  33.33 
 
 		 230 aa  119  4.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  31.84 
 
 		 246 aa  118  7.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  35.93 
 
 		 263 aa  118  7.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal  1 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  30.87 
 
 		 267 aa  116  3.9999999999999997e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  32.07 
 
 		 255 aa  115  3.9999999999999997e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  29.66 
 
 		 250 aa  115  7.999999999999999e-25  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  35.74 
 
 		 236 aa  114  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  32.24 
 
 		 252 aa  114  2.0000000000000002e-24  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  32.75 
 
 		 281 aa  112  6e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.999867 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  29.05 
 
 		 250 aa  111  1.0000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.0375093 
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  31.14 
 
 		 244 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  33.33 
 
 		 249 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  32.88 
 
 		 249 aa  109  4.0000000000000004e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  30.7 
 
 		 281 aa  107  1e-22  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  30.26 
 
 		 244 aa  107  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  32.02 
 
 		 234 aa  104  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0477074 
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  32.39 
 
 		 249 aa  104  2e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  28.7 
 
 		 241 aa  103  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  31.79 
 
 		 307 aa  102  4e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  33.78 
 
 		 243 aa  102  6e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  28.26 
 
 		 243 aa  99.8  3e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  27.83 
 
 		 247 aa  99.4  4e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal  1 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  28.25 
 
 		 242 aa  99.4  4e-20  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  33.8 
 
 		 242 aa  99  6e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  32.24 
 
 		 226 aa  97.4  2e-19  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal  1 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  28.76 
 
 		 242 aa  97.1  2e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  30.24 
 
 		 315 aa  96.3  4e-19  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  25.96 
 
 		 263 aa  94.7  1e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  31.8 
 
 		 293 aa  94.4  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal  1 
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  28.14 
 
 		 274 aa  89.4  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  31.82 
 
 		 238 aa  88.2  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  31.82 
 
 		 238 aa  88.2  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  31.36 
 
 		 250 aa  84.7  0.000000000000001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.395788 
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  32.65 
 
 		 256 aa  85.1  0.000000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  25.11 
 
 		 260 aa  85.1  0.000000000000001  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal  1 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  31.82 
 
 		 246 aa  84  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  29.41 
 
 		 245 aa  83.2  0.000000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal  1 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  30.45 
 
 		 250 aa  82.4  0.000000000000007  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal  1 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  31.08 
 
 		 254 aa  81.3  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal  1 
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  28.36 
 
 		 262 aa  80.9  0.00000000000002  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal  1 
 
 
-
 
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