More than 300 homologs were found in PanDaTox collection
for query gene RSP_0044 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1632  methyl-accepting chemotaxis sensory transducer  86.71 
 
 
654 aa  752    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1679  methyl-accepting chemotaxis sensory transducer  98.77 
 
 
567 aa  1099    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00756362  hitchhiker  0.00632021 
 
 
-
 
NC_007493  RSP_0044  putative cytoplasmic chemoreceptor, TlpT  100 
 
 
567 aa  1113    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0134213  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
600 aa  241  2e-62  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
759 aa  227  4e-58  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
832 aa  220  5e-56  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
602 aa  211  3e-53  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
567 aa  210  5e-53  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  37.47 
 
 
698 aa  206  1e-51  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  38.67 
 
 
779 aa  202  9.999999999999999e-51  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
755 aa  202  9.999999999999999e-51  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
623 aa  199  2.0000000000000003e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  31.99 
 
 
752 aa  197  4.0000000000000005e-49  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  43.93 
 
 
744 aa  196  9e-49  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  45.42 
 
 
702 aa  192  1e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  43.17 
 
 
370 aa  192  1e-47  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  32.94 
 
 
733 aa  191  2.9999999999999997e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  34.64 
 
 
705 aa  190  5e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  43.51 
 
 
740 aa  187  3e-46  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
535 aa  188  3e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
843 aa  187  6e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  30.57 
 
 
753 aa  186  1.0000000000000001e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  38.82 
 
 
706 aa  185  2.0000000000000003e-45  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
740 aa  185  2.0000000000000003e-45  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
527 aa  184  5.0000000000000004e-45  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  36.98 
 
 
596 aa  183  9.000000000000001e-45  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
578 aa  181  4e-44  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
542 aa  180  5.999999999999999e-44  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  41.84 
 
 
695 aa  179  1e-43  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
659 aa  179  1e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  42.76 
 
 
516 aa  178  2e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  42.91 
 
 
741 aa  178  2e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  30.84 
 
 
745 aa  178  2e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_013512  Sdel_1991  chemotaxis sensory transducer  49.15 
 
 
661 aa  177  3e-43  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
589 aa  176  7e-43  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  43.48 
 
 
676 aa  176  9.999999999999999e-43  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
583 aa  176  9.999999999999999e-43  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
706 aa  175  1.9999999999999998e-42  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  39.93 
 
 
579 aa  174  2.9999999999999996e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  34.48 
 
 
792 aa  174  2.9999999999999996e-42  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.97 
 
 
864 aa  174  3.9999999999999995e-42  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  30.92 
 
 
691 aa  173  7.999999999999999e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  39.05 
 
 
781 aa  173  7.999999999999999e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
618 aa  173  9e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  32.76 
 
 
775 aa  172  1e-41  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
552 aa  172  1e-41  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
532 aa  172  1e-41  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  35.59 
 
 
740 aa  171  3e-41  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
610 aa  171  4e-41  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  39.04 
 
 
586 aa  171  4e-41  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  32.34 
 
 
678 aa  170  5e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_27960  methyl accepting chemotaxis sensory transducer  48.99 
 
 
575 aa  171  5e-41  Azotobacter vinelandii DJ  Bacteria  normal  0.187216  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  40 
 
 
557 aa  170  5e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_51670  methyl accepting chemotaxis sensory transducer  48.99 
 
 
566 aa  170  6e-41  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
618 aa  169  9e-41  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
719 aa  169  1e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
544 aa  169  1e-40  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  41.22 
 
 
515 aa  168  2e-40  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  42.86 
 
 
586 aa  169  2e-40  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
578 aa  167  2.9999999999999998e-40  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  35.26 
 
 
945 aa  167  2.9999999999999998e-40  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
584 aa  168  2.9999999999999998e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.92 
 
 
606 aa  167  2.9999999999999998e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  36.54 
 
 
860 aa  167  2.9999999999999998e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.78 
 
 
610 aa  167  4e-40  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
537 aa  167  4e-40  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  41.38 
 
 
559 aa  167  5e-40  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
642 aa  167  5.9999999999999996e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
585 aa  166  6.9999999999999995e-40  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
539 aa  166  6.9999999999999995e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  48.48 
 
 
575 aa  166  8e-40  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
656 aa  166  8e-40  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
656 aa  166  8e-40  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
554 aa  166  1.0000000000000001e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
592 aa  166  1.0000000000000001e-39  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
657 aa  166  1.0000000000000001e-39  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
628 aa  166  1.0000000000000001e-39  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
591 aa  165  2.0000000000000002e-39  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
793 aa  165  2.0000000000000002e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
653 aa  165  2.0000000000000002e-39  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.9 
 
 
1123 aa  165  2.0000000000000002e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  39.85 
 
 
598 aa  165  2.0000000000000002e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
657 aa  166  2.0000000000000002e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
653 aa  165  2.0000000000000002e-39  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
545 aa  164  3e-39  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  39.6 
 
 
706 aa  164  3e-39  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_012917  PC1_0380  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
539 aa  164  3e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.78 
 
 
513 aa  164  4.0000000000000004e-39  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  38.41 
 
 
723 aa  164  4.0000000000000004e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
513 aa  164  4.0000000000000004e-39  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
556 aa  164  4.0000000000000004e-39  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
657 aa  164  5.0000000000000005e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
579 aa  164  5.0000000000000005e-39  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  35.42 
 
 
767 aa  164  5.0000000000000005e-39  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
668 aa  164  5.0000000000000005e-39  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
581 aa  164  6e-39  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  42.92 
 
 
661 aa  163  7e-39  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  42.92 
 
 
661 aa  163  7e-39  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  39.08 
 
 
552 aa  163  8.000000000000001e-39  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  29.17 
 
 
619 aa  163  9e-39  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
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