9 homologs were found in PanDaTox collection
for query gene RPD_3089 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_3089  hypothetical protein  100 
 
 		 148 aa  288  1e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.693168  normal  0.0494541 
 
 
-
 
NC_007778  RPB_0034  hypothetical protein  78.17 
 
 		 148 aa  233  5.0000000000000005e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.26926  normal  1 
 
 
-
 
NC_011004  Rpal_2120  hypothetical protein  76.71 
 
 		 150 aa  225  2e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0217734  n/a   
 
 
-
 
NC_007925  RPC_2963  hypothetical protein  70.95 
 
 		 148 aa  219  9.999999999999999e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.257701  normal  1 
 
 
-
 
NC_009784  VIBHAR_06477  hypothetical protein  43.94 
 
 		 154 aa  122  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003295  RSc1848  hypothetical protein  47.86 
 
 		 151 aa  120  4e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0188402  normal  0.0439501 
 
 
-
 
NC_007643  Rru_A1442  putative lipoprotein  47.3 
 
 		 159 aa  109  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.425847  n/a   
 
 
-
 
NC_009092  Shew_3149  putative lipoprotein  43.75 
 
 		 152 aa  99.4  1e-20  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_1104  putative lipoprotein  41.13 
 
 		 152 aa  71.2  0.000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.943049 
 
 
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