7 homologs were found in PanDaTox collection
for query gene RPD_2339 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_2339  hypothetical protein  100 
 
 
519 aa  1050    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.431758  normal  0.266165 
 
 
-
 
NC_002939  GSU2377  hypothetical protein  44.64 
 
 
524 aa  448  1.0000000000000001e-124  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00270409  n/a   
 
 
-
 
NC_008709  Ping_2306  hypothetical protein  23.64 
 
 
504 aa  80.5  0.00000000000006  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2909  hypothetical protein  21.98 
 
 
647 aa  64.7  0.000000004  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000312095  n/a   
 
 
-
 
NC_008391  Bamb_4434  hypothetical protein  21.25 
 
 
518 aa  55.8  0.000002  Burkholderia ambifaria AMMD  Bacteria  unclonable  0.0000000330507  unclonable  0.0000165626 
 
 
-
 
NC_008541  Arth_3633  hypothetical protein  24.45 
 
 
535 aa  47.4  0.0006  Arthrobacter sp. FB24  Bacteria  unclonable  0.0000000448571  n/a   
 
 
-
 
NC_009921  Franean1_6317  hypothetical protein  24.5 
 
 
552 aa  47  0.0008  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
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