5 homologs were found in PanDaTox collection
for query gene RPD_0084 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_0084  hypothetical protein  100 
 
 
142 aa  288  2e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.441837  normal  0.0126856 
 
 
-
 
NC_007778  RPB_0665  hypothetical protein  78.57 
 
 
144 aa  228  2e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.265759  normal  0.174842 
 
 
-
 
NC_011004  Rpal_0622  hypothetical protein  65.03 
 
 
142 aa  177  5.999999999999999e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7343  hypothetical protein  56.15 
 
 
141 aa  142  1e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4845  hypothetical protein  56.8 
 
 
123 aa  140  5e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.562837  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>