12 homologs were found in PanDaTox collection
for query gene RPC_1814 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_1814  hypothetical protein  100 
 
 
106 aa  208  2e-53  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.00514089  normal  0.210861 
 
 
-
 
NC_011004  Rpal_2107  phage head-tail adaptor  57.84 
 
 
106 aa  111  4.0000000000000004e-24  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.0000913965  n/a   
 
 
-
 
NC_007958  RPD_1981  hypothetical protein  55.88 
 
 
109 aa  105  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.50206 
 
 
-
 
NC_007778  RPB_3467  Phage head-tail adaptor, putative  56.86 
 
 
106 aa  101  3e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0252975  normal 
 
 
-
 
NC_011989  Avi_1340  hypothetical protein  36.7 
 
 
107 aa  67.8  0.00000000004  Agrobacterium vitis S4  Bacteria  normal  0.0268917  n/a   
 
 
-
 
NC_009720  Xaut_3159  phage head-tail adaptor, putative  35.42 
 
 
106 aa  51.2  0.000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.182206  normal  0.0118931 
 
 
-
 
NC_004310  BR0591  hypothetical protein  31.18 
 
 
112 aa  49.3  0.00002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0592  hypothetical protein  31.18 
 
 
112 aa  49.3  0.00002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2233  phage head-tail adaptor, putative  35.53 
 
 
112 aa  43.1  0.001  Enterobacter sp. 638  Bacteria  normal  normal  0.921733 
 
 
-
 
NC_010623  Bphy_3392  phage head-tail adaptor  38.67 
 
 
113 aa  43.1  0.001  Burkholderia phymatum STM815  Bacteria  normal  0.444321  hitchhiker  0.00000000238294 
 
 
-
 
NC_011769  DvMF_1652  phage head-tail adaptor  33.67 
 
 
104 aa  43.1  0.001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007794  Saro_0653  Phage head-tail adaptor, putative  36.45 
 
 
116 aa  42.7  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.305971  n/a   
 
 
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